RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 STON1Q9Y6Q2 735 aa10.03□□□□□ -0.8
CLK3-208ENST00000562626 FGF10O15520 208 aaPredicted RBP10.02□□□□□ -0.81
CLK3-208ENST00000562626 PSTPIP1O43586 416 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 ZNF821O75541 412 aaPredicted RBP10.02□□□□□ -0.81
CLK3-208ENST00000562626 KRT37O76014 449 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 KRT7P08729 469 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 DLDP09622 509 aaKnown RBP10.02□□□□□ -0.81
CLK3-208ENST00000562626 POLR2EP19388 210 aaKnown RBP10.02□□□□□ -0.81
CLK3-208ENST00000562626 CTNNA2P26232 953 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 PI4KAP42356 2102 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 CDKN2BP42772 138 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 PXNP49023 591 aaPredicted RBP10.02□□□□□ -0.81
CLK3-208ENST00000562626 DNA2P51530 1060 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 MRPS21P82921 87 aaKnown RBP10.02□□□□□ -0.81
CLK3-208ENST00000562626 GBE1Q04446 702 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 ZNF211Q13398 564 aaPredicted RBP10.02□□□□□ -0.81
CLK3-208ENST00000562626 EIF4HQ15056 248 aaKnown RBP10.02□□□□□ -0.81
CLK3-208ENST00000562626 FBXO43Q4G163 708 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 C6orf118Q5T5N4 469 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 ACBD5Q5T8D3 534 aaPredicted RBP10.02□□□□□ -0.81
CLK3-208ENST00000562626 LRRC38Q5VT99 294 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 NPNTQ6UXI9 565 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 B4GALNT4Q76KP1 1039 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 KATNAL2Q8IYT4 538 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 UMODL1-AS1Q8N2C9 162 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 SYNPOQ8N3V7 929 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 RNF10Q8N5U6 811 aaKnown RBP10.02□□□□□ -0.81
CLK3-208ENST00000562626 PLD5Q8N7P1 536 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 KCTD6Q8NC69 237 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 PRSS33Q8NF86 280 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 RNF157Q96PX1 679 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 HHIPQ96QV1 700 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 GABRG3Q99928 467 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 ZNF670Q9BS34 389 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 SPON2Q9BUD6 331 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 CATSPERBQ9H7T0 1116 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 PDFQ9HBH1 243 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 ATP13A1Q9HD20 1204 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 SPATA6Q9NWH7 488 aaPredicted RBP10.02□□□□□ -0.81
CLK3-208ENST00000562626 LCMT1Q9UIC8 334 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 VPS28Q9UK41 221 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 MMP17Q9ULZ9 603 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 PCDHA3Q9Y5H8 950 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 SDK1Q7Z5N4 2213 aa10.02□□□□□ -0.81
CLK3-208ENST00000562626 USP34Q70CQ2 3546 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 TRPM6Q9BX84 2022 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 J3KR12 359 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 CBX4O00257 560 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 FANCGO15287 622 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 NCAM2O15394 837 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 KRT86O43790 486 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 RAMP2O60895 175 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 PYGMP11217 842 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 SRCP12931 536 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 HOXB2P14652 356 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 PECAM1P16284 738 aaPredicted RBP10.01□□□□□ -0.81
CLK3-208ENST00000562626 NTSR1P30989 418 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 HTR7P34969 479 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 ARL4AP40617 200 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 PAPOLAP51003 745 aaKnown RBP10.01□□□□□ -0.81
CLK3-208ENST00000562626 ECT2LQ008S8 904 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 SERINC3Q13530 473 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 SLC12A1Q13621 1099 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 DMC1Q14565 340 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 POLD3Q15054 466 aaPredicted RBP10.01□□□□□ -0.81
CLK3-208ENST00000562626 PAFAH1B3Q15102 231 aaKnown RBP10.01□□□□□ -0.81
CLK3-208ENST00000562626 PDK2Q15119 407 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 FNDC3BQ53EP0 1204 aaKnown RBP10.01□□□□□ -0.81
CLK3-208ENST00000562626 ZFYVE27Q5T4F4 411 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 ZNF783Q6ZMS7 281 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 SPOCD1Q6ZMY3 1216 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 SYT13Q7L8C5 426 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 PEX26Q7Z412 305 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 CHPFQ8IZ52 775 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 SPEM1Q8N4L4 309 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 DCAF4L2Q8NA75 395 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 FRS2Q8WU20 508 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 ZNF419Q96HQ0 510 aaPredicted RBP10.01□□□□□ -0.81
CLK3-208ENST00000562626 HES6Q96HZ4 224 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 TSGA10Q9BZW7 698 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 PRMT8Q9NR22 394 aaPredicted RBP10.01□□□□□ -0.81
CLK3-208ENST00000562626 SAE1Q9UBE0 346 aaPredicted RBP10.01□□□□□ -0.81
CLK3-208ENST00000562626 AMFRQ9UKV5 643 aa10.01□□□□□ -0.81
CLK3-208ENST00000562626 hCG_1818297A0A087WSY0 165 aa10□□□□□ -0.81
CLK3-208ENST00000562626 TCRBV7S2A1N4TA0A589 114 aa10□□□□□ -0.81
CLK3-208ENST00000562626 DFFAO00273 331 aa10□□□□□ -0.81
CLK3-208ENST00000562626 DAPK3O43293 454 aa10□□□□□ -0.81
CLK3-208ENST00000562626 KDELR3O43731 214 aa10□□□□□ -0.81
CLK3-208ENST00000562626 SIN3BO75182 1162 aa10□□□□□ -0.81
CLK3-208ENST00000562626 GJB3O75712 270 aa10□□□□□ -0.81
CLK3-208ENST00000562626 PEX11BO96011 259 aa10□□□□□ -0.81
CLK3-208ENST00000562626 GABRG2P18507 467 aa10□□□□□ -0.81
CLK3-208ENST00000562626 METAP1P53582 386 aa10□□□□□ -0.81
CLK3-208ENST00000562626 COPAP53621 1224 aa10□□□□□ -0.81
CLK3-208ENST00000562626 DYNLT1P63172 113 aa10□□□□□ -0.81
CLK3-208ENST00000562626 CRY1Q16526 586 aa10□□□□□ -0.81
CLK3-208ENST00000562626 MEI1Q5TIA1 1274 aa10□□□□□ -0.81
CLK3-208ENST00000562626 SLC9A4Q6AI14 798 aa10□□□□□ -0.81
CLK3-208ENST00000562626 IL31Q6EBC2 164 aa10□□□□□ -0.81
CLK3-208ENST00000562626 TMCO3Q6UWJ1 677 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms