RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CXorf51AA0A1B0GTR3 108 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 FAM72CH0Y354 149 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 H0Y858 1186 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 NEMP1O14524 444 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 ADH1BP00325 375 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 IL12RB1P42701 662 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 MAPK8P45983 427 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 NR2C2P49116 596 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 PAPOLAP51003 745 aaKnown RBP10.94□□□□□ -0.66
TPM1-229ENST00000561242 DYNLT1P63172 113 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 SLC25A11Q02978 314 aaKnown RBP10.94□□□□□ -0.66
TPM1-229ENST00000561242 ZBTB16Q05516 673 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 SIM2Q14190 667 aaPredicted RBP10.94□□□□□ -0.66
TPM1-229ENST00000561242 TFDP3Q5H9I0 405 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 SYCP2LQ5T4T6 812 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 FAM72AQ5TYM5 149 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 MARC1Q5VT66 337 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 NAIF1Q69YI7 327 aaPredicted RBP10.94□□□□□ -0.66
TPM1-229ENST00000561242 FAM72DQ6L9T8 149 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 ADIPOR2Q86V24 386 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 FAM72BQ86X60 149 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 VSIG1Q86XK7 387 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 UMODL1-AS1Q8N2C9 162 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 PCDH20Q8N6Y1 951 aaKnown RBP10.94□□□□□ -0.66
TPM1-229ENST00000561242 TTC13Q8NBP0 860 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 EXD1Q8NHP7 514 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 GDAP1L1Q96MZ0 367 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 KLHL11Q9NVR0 708 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 SEPT3Q9UH03 358 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 VPS51Q9UID3 782 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 GMEB2Q9UKD1 530 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 CLEC4EQ9ULY5 219 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 NENFQ9UMX5 172 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 PPP2R2CQ9Y2T4 447 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 HYOU1Q9Y4L1 999 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 TTLL3Q9Y4R7 772 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 A0A0D9SEW6 157 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 CCDC163A0A0D9SF12 145 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 H7C0C1 242 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 SGK1O00141 431 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 MTSS1O43312 755 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 RPP40O75818 363 aaKnown RBP10.93□□□□□ -0.66
TPM1-229ENST00000561242 POP4O95707 220 aaKnown RBP10.93□□□□□ -0.66
TPM1-229ENST00000561242 SP9P0CG40 484 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 HLA-EP13747 358 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 IL1R2P27930 398 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 HSPA9P38646 679 aaKnown RBP10.93□□□□□ -0.66
TPM1-229ENST00000561242 DPP6P42658 865 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 ATP5OP48047 213 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 FNTBP49356 437 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 NUMBP49757 651 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 IL10RBQ08334 325 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 ZNF252P-AS1Q0IIN9 211 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 AP1B1Q10567 949 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 DPYSL3Q14195 570 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 ELAVL3Q14576 367 aaKnown RBP10.93□□□□□ -0.66
TPM1-229ENST00000561242 CA9Q16790 459 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 GAB4Q2WGN9 574 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 HNRNPA1L2Q32P51 320 aaKnown RBP10.93□□□□□ -0.66
TPM1-229ENST00000561242 RAB6CQ53S08 254 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 INO80DQ53TQ3 878 aaPredicted RBP10.93□□□□□ -0.66
TPM1-229ENST00000561242 CARD16Q5EG05 197 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 DAB2IPQ5VWQ8 1189 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 CXorf57Q6NSI4 855 aaKnown RBP10.93□□□□□ -0.66
TPM1-229ENST00000561242 LINGO4Q6UY18 593 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 LPCAT2Q7L5N7 544 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 KBTBD6Q86V97 674 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 WDR5BQ86VZ2 330 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 KATNAL2Q8IYT4 538 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 SKA1Q96BD8 255 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 ERLEC1Q96DZ1 483 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 RNF157Q96PX1 679 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 PEBP4Q96S96 227 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 NAP1L3Q99457 506 aaPredicted RBP10.93□□□□□ -0.66
TPM1-229ENST00000561242 GABRG3Q99928 467 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 HEPHQ9BQS7 1158 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 RAB6CQ9H0N0 254 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 ZDHHC4Q9NPG8 344 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 ANLNQ9NQW6 1124 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 TRMT1Q9NXH9 659 aaKnown RBP10.93□□□□□ -0.66
TPM1-229ENST00000561242 SEPT10Q9P0V9 454 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 IPO11Q9UI26 975 aaKnown RBP10.93□□□□□ -0.66
TPM1-229ENST00000561242 PCDHA3Q9Y5H8 950 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 CHD7Q9P2D1 2997 aa10.93□□□□□ -0.66
TPM1-229ENST00000561242 GOLGA6CA6NDK9 693 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 GOLGA6BA6NDN3 693 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 LRRC72A6NJI9 287 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 TTC34A8MYJ7 566 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 ZNF487B1APH4 448 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 KPNA3O00505 521 aaPredicted RBP10.92□□□□□ -0.66
TPM1-229ENST00000561242 KRIT1O00522 736 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 ALOX15BO15296 676 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 SNAP91O60641 907 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 RNASEH2AO75792 299 aaKnown RBP10.92□□□□□ -0.66
TPM1-229ENST00000561242 PAPSS2O95340 614 aaPredicted RBP10.92□□□□□ -0.66
TPM1-229ENST00000561242 FTCDO95954 541 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 GOLGA6DP0CG33 693 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 C5AR1P21730 350 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 TGM2P21980 687 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 CES1P23141 567 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms