RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 DPP10Q8N608 796 aa3.56□□□□□ -1.84
USP8-216ENST00000561206 CMASQ8NFW8 434 aaPredicted RBP3.56□□□□□ -1.84
USP8-216ENST00000561206 OR14A16Q8NHC5 309 aa3.56□□□□□ -1.84
USP8-216ENST00000561206 REXO5Q96IC2 774 aaKnown RBP3.56□□□□□ -1.84
USP8-216ENST00000561206 RETREG1Q9H6L5 497 aa3.56□□□□□ -1.84
USP8-216ENST00000561206 ACTR5Q9H9F9 607 aaPredicted RBP3.56□□□□□ -1.84
USP8-216ENST00000561206 NECTIN3Q9NQS3 549 aa3.56□□□□□ -1.84
USP8-216ENST00000561206 TRPC5Q9UL62 973 aaPredicted RBP3.56□□□□□ -1.84
USP8-216ENST00000561206 COPG1Q9Y678 874 aaKnown RBP3.56□□□□□ -1.84
USP8-216ENST00000561206 STMND1H3BQB6 276 aa3.55□□□□□ -1.84
USP8-216ENST00000561206 LDB2O43679 373 aa3.55□□□□□ -1.84
USP8-216ENST00000561206 RPP40O75818 363 aaKnown RBP3.55□□□□□ -1.84
USP8-216ENST00000561206 BAG4O95429 457 aaKnown RBP3.55□□□□□ -1.84
USP8-216ENST00000561206 SNRNP70P08621 437 aaKnown RBP3.55□□□□□ -1.84
USP8-216ENST00000561206 HARSP12081 509 aaKnown RBP3.55□□□□□ -1.84
USP8-216ENST00000561206 ATF3P18847 181 aa3.55□□□□□ -1.84
USP8-216ENST00000561206 ZBTB16Q05516 673 aa3.55□□□□□ -1.84
USP8-216ENST00000561206 TRAF3Q13114 568 aa3.55□□□□□ -1.84
USP8-216ENST00000561206 ZNF284Q2VY69 593 aa3.55□□□□□ -1.84
USP8-216ENST00000561206 ARL6IP4Q66PJ3 421 aaKnown RBP3.55□□□□□ -1.84
USP8-216ENST00000561206 FBXO38Q6PIJ6 1188 aa3.55□□□□□ -1.84
USP8-216ENST00000561206 RFLNBQ8N5W9 214 aa3.55□□□□□ -1.84
USP8-216ENST00000561206 TMED6Q8WW62 240 aa3.55□□□□□ -1.84
USP8-216ENST00000561206 DUX5Q96PT3 197 aa3.55□□□□□ -1.84
USP8-216ENST00000561206 FIZ1Q96SL8 496 aa3.55□□□□□ -1.84
USP8-216ENST00000561206 EPS8L2Q9H6S3 715 aa3.55□□□□□ -1.84
USP8-216ENST00000561206 RAB21Q9UL25 225 aa3.55□□□□□ -1.84
USP8-216ENST00000561206 NFU1Q9UMS0 254 aa3.55□□□□□ -1.84
USP8-216ENST00000561206 SLC12A4Q9UP95 1085 aa3.55□□□□□ -1.84
USP8-216ENST00000561206 PKP3Q9Y446 797 aa3.55□□□□□ -1.84
USP8-216ENST00000561206 BUB3O43684 328 aa3.54□□□□□ -1.84
USP8-216ENST00000561206 UNGP13051 313 aaPredicted RBP3.54□□□□□ -1.84
USP8-216ENST00000561206 AVPR1AP37288 418 aa3.54□□□□□ -1.84
USP8-216ENST00000561206 AMTP48728 403 aa3.54□□□□□ -1.84
USP8-216ENST00000561206 NUDT6P53370 316 aa3.54□□□□□ -1.84
USP8-216ENST00000561206 TMPRSS3P57727 454 aa3.54□□□□□ -1.84
USP8-216ENST00000561206 RBM6P78332 1123 aaKnown RBP3.54□□□□□ -1.84
USP8-216ENST00000561206 KIF19Q2TAC6 998 aa3.54□□□□□ -1.84
USP8-216ENST00000561206 VWA5B1Q5TIE3 1220 aa3.54□□□□□ -1.84
USP8-216ENST00000561206 ANKS1BQ7Z6G8 1248 aa3.54□□□□□ -1.84
USP8-216ENST00000561206 TMEM217Q8N7C4 229 aa3.54□□□□□ -1.84
USP8-216ENST00000561206 BRI3BPQ8WY22 251 aa3.54□□□□□ -1.84
USP8-216ENST00000561206 IGSF21Q96ID5 467 aa3.54□□□□□ -1.84
USP8-216ENST00000561206 IL25Q9H293 177 aa3.54□□□□□ -1.84
USP8-216ENST00000561206 ZDHHC7Q9NXF8 308 aa3.54□□□□□ -1.84
USP8-216ENST00000561206 IL36RNQ9UBH0 155 aa3.54□□□□□ -1.84
USP8-216ENST00000561206 ASAP2O43150 1006 aa3.53□□□□□ -1.84
USP8-216ENST00000561206 KCNJ13O60928 360 aa3.53□□□□□ -1.84
USP8-216ENST00000561206 FGF18O76093 207 aa3.53□□□□□ -1.84
USP8-216ENST00000561206 PAK4O96013 591 aaPredicted RBP3.53□□□□□ -1.84
USP8-216ENST00000561206 MYZAPP0CAP1 466 aa3.53□□□□□ -1.84
USP8-216ENST00000561206 EEF1GP26641 437 aaKnown RBP3.53□□□□□ -1.84
USP8-216ENST00000561206 THPOP40225 353 aa3.53□□□□□ -1.84
USP8-216ENST00000561206 GLIPR1P48060 266 aa3.53□□□□□ -1.84
USP8-216ENST00000561206 PPP3CCP48454 512 aa3.53□□□□□ -1.84
USP8-216ENST00000561206 TUBA1BP68363 451 aa3.53□□□□□ -1.84
USP8-216ENST00000561206 GRSF1Q12849 480 aaKnown RBP eCLIP3.53□□□□□ -1.84
USP8-216ENST00000561206 ILF3Q12906 894 aaKnown RBP eCLIP3.53□□□□□ -1.84
USP8-216ENST00000561206 IFIT5Q13325 482 aaKnown RBP3.53□□□□□ -1.84
USP8-216ENST00000561206 PKP1Q13835 747 aa3.53□□□□□ -1.84
USP8-216ENST00000561206 SLC30A9Q6PML9 568 aa3.53□□□□□ -1.84
USP8-216ENST00000561206 NEXN-AS1Q8NBZ9 246 aa3.53□□□□□ -1.84
USP8-216ENST00000561206 FAM110DQ8TAY7 271 aaPredicted RBP3.53□□□□□ -1.84
USP8-216ENST00000561206 CLEC4CQ8WTT0 213 aa3.53□□□□□ -1.84
USP8-216ENST00000561206 WDR60Q8WVS4 1066 aa3.53□□□□□ -1.84
USP8-216ENST00000561206 PKP4Q99569 1192 aa3.53□□□□□ -1.84
USP8-216ENST00000561206 SORBS1Q9BX66 1292 aaKnown RBP3.53□□□□□ -1.84
USP8-216ENST00000561206 EGLN1Q9GZT9 426 aa3.53□□□□□ -1.84
USP8-216ENST00000561206 HIPK3Q9H422 1215 aa3.53□□□□□ -1.84
USP8-216ENST00000561206 CCDC134Q9H6E4 229 aa3.53□□□□□ -1.84
USP8-216ENST00000561206 ARL15Q9NXU5 204 aa3.53□□□□□ -1.84
USP8-216ENST00000561206 RAP2CQ9Y3L5 183 aa3.53□□□□□ -1.84
USP8-216ENST00000561206 TBC1D3DA0A087WVF3 549 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 TBC1D3IA0A087WXS9 549 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 TBC1D3EA0A087X179 549 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 TBC1D3KA0A087X1G2 549 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 TBC1D3BA6NDS4 549 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 TBC1D3FA6NER0 549 aaPredicted RBP3.52□□□□□ -1.85
USP8-216ENST00000561206 SLC38A8A6NNN8 435 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 TBC1D3LB9A6J9 549 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 NCK2O43639 380 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 IGLV2-11P01706 119 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 TBC1D3HP0C7X1 549 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 DAOP14920 347 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 KLRC2P26717 231 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 KLRK1P26718 216 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 ALDH18A1P54886 795 aaKnown RBP3.52□□□□□ -1.85
USP8-216ENST00000561206 BNC1Q01954 994 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 RAB30Q15771 203 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 PLK5Q496M5 336 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 TBC1D3GQ6DHY5 549 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 TBC1D3CQ6IPX1 549 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 HEPHL1Q6MZM0 1159 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 MYPOPQ86VE0 399 aaPredicted RBP3.52□□□□□ -1.85
USP8-216ENST00000561206 TMEM200AQ86VY9 491 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 TBC1D3Q8IZP1 549 aaPredicted RBP3.52□□□□□ -1.85
USP8-216ENST00000561206 TCP11L2Q8N4U5 519 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 HORMAD2Q8N7B1 307 aa3.52□□□□□ -1.85
USP8-216ENST00000561206 ENDOVQ8N8Q3 282 aaKnown RBP3.52□□□□□ -1.85
USP8-216ENST00000561206 TMEM163Q8TC26 289 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms