RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 MUC6Q6W4X9 2439 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 PI4KAP42356 2102 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 NUMA1Q14980 2115 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 A0A0U1RQJ8 604 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 TARSL2A2RTX5 802 aaKnown RBP9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 GRID2IPA4D2P6 1211 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 ZSCAN5CA6NGD5 496 aaPredicted RBP9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 DAPK3O43293 454 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 BUB1O43683 1085 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 SPOPO43791 374 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 LILRB5O75023 590 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 APBB3O95704 486 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 CD160O95971 181 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 CD48P09326 243 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 HOXB2P14652 356 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 AMPD1P23109 780 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 PRKCHP24723 683 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 CTNNA1P35221 906 aaKnown RBP9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 ACVRL1P37023 503 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 NNMTP40261 264 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 CTSOP43234 321 aaPredicted RBP9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 SSR1P43307 286 aaKnown RBP9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 CLCN6P51797 869 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 GEMIN4P57678 1058 aaKnown RBP9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 ST8SIA6P61647 398 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 ARF5P84085 180 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 CCDC173Q0VFZ6 552 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 TCF15Q12870 199 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 SERINC3Q13530 473 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 KRT81Q14533 505 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 PAFAH1B3Q15102 231 aaKnown RBP9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 HNRNPA1L2Q32P51 320 aaKnown RBP9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 ANKRD20A8PQ5CZ79 823 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 RETSATQ6NUM9 610 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 SERPINA13PQ6UXR4 307 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 METTL3Q86U44 580 aaKnown RBP9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 NT5DC3Q86UY8 548 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 LRRC49Q8IUZ0 686 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 ARHGAP12Q8IWW6 846 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 PLPP6Q8IY26 295 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 KATNAL2Q8IYT4 538 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 SYCE1Q8N0S2 351 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 KCTD6Q8NC69 237 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 ZBTB44Q8NCP5 570 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 PRSS33Q8NF86 280 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 PCDH19Q8TAB3 1148 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 FRS2Q8WU20 508 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 ATRIPQ8WXE1 791 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 RAPGEF5Q92565 580 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 PTPRN2Q92932 1015 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 ISG20Q96AZ6 181 aaKnown RBP9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 RNF157Q96PX1 679 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 SLC39A8Q9C0K1 460 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 ATP13A1Q9HD20 1204 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 ZDHHC4Q9NPG8 344 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 POLR3BQ9NW08 1133 aaPredicted RBP9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 CACNA2D2Q9NY47 1150 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 TRIM10Q9UDY6 481 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 SLCO3A1Q9UIG8 710 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 SLC25A13Q9UJS0 675 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 HPCAL4Q9UM19 191 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 PCDHA3Q9Y5H8 950 aa9.85□□□□□ -0.83
RABGGTA-221ENST00000561055 LRRK1Q38SD2 2015 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 EDDM13A0A1B0GTR0 161 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 CCDC66A2RUB6 948 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 MIF4GDA9UHW6 222 aaKnown RBP9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 RASA4BC9J798 803 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 RASA4O43374 803 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 SNAP91O60641 907 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 SRCP12931 536 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 GABRG2P18507 467 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 CTNNA2P26232 953 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 CNR2P34972 360 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 SERPINB6P35237 376 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 PEX5P50542 639 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 CSTF1Q05048 431 aaKnown RBP9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 MMRN1Q13201 1228 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 STARD3Q14849 445 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 FNDC3BQ53EP0 1204 aaKnown RBP9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 INO80DQ53TQ3 878 aaPredicted RBP9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 C9orf64Q5T6V5 341 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 IL31Q6EBC2 164 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 KIAA1211LQ6NV74 962 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 TMCO3Q6UWJ1 677 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 WDR5BQ86VZ2 330 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 LONP2Q86WA8 852 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 RCOR2Q8IZ40 523 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 NPWQ8N729 165 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 PQLC3Q8N755 202 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 TSTD1Q8NFU3 115 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 EXD1Q8NHP7 514 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 CASKIN2Q8WXE0 1202 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 RPL10LQ96L21 214 aaKnown RBP9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 CALN1Q9BXU9 219 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 CEP44Q9C0F1 390 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 KCNF1Q9H3M0 494 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 GOLPH3Q9H4A6 298 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 PRSS16Q9NQE7 514 aa9.84□□□□□ -0.83
RABGGTA-221ENST00000561055 ETNK2Q9NVF9 386 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms