RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 PSMC3P17980 439 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 SDC4P31431 198 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 ENTPD1P49961 510 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 BCAP31P51572 246 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 ROR1Q01973 937 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 SNX17Q15036 470 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 PDK2Q15119 407 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 ZNF829Q3KNS6 432 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 MAP7D1Q3KQU3 841 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 BOLA3Q53S33 107 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 IYDQ6PHW0 289 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 SCUBE3Q8IX30 993 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 POU5F2Q8N7G0 328 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 RIN3Q8TB24 985 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 PIWIL2Q8TC59 973 aaKnown RBP14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 KBTBD7Q8WVZ9 684 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 CCDC68Q9H2F9 335 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 PIN4Q9Y237 131 aaKnown RBP14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 SMIM28A0A1B0GU29 152 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 TCRBV7S3A2A0A539 114 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 TCRBV9S1A1TA0A576 114 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 HCRTO43612 131 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 SIN3BO75182 1162 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 TMEM63AO94886 807 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 ESRRBO95718 433 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 CD4P01730 458 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 IL4RP24394 825 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 SNX16P57768 344 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 TGFBIQ15582 683 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 CLPPQ16740 277 aaPredicted RBP14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 BBS9Q3SYG4 887 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 CCDC153Q494R4 210 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 XKR4Q5GH76 650 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 FBXO47Q5MNV8 452 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 UBXN11Q5T124 520 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 STXBP5Q5T5C0 1151 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 NIPAL1Q6NVV3 410 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 SCYL2Q6P3W7 929 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 DARS2Q6PI48 645 aaKnown RBP14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 AMIGO2Q86SJ2 522 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 HPS6Q86YV9 775 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 ZDHHC17Q8IUH5 632 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 TAB3Q8N5C8 712 aaPredicted RBP14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 SHKBP1Q8TBC3 707 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 HM13Q8TCT9 377 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 CASP10Q92851 521 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 CGREF1Q99674 301 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 RTKNQ9BST9 563 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 NGRNQ9NPE2 291 aaKnown RBP14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 GPATCH2LQ9NWQ4 482 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 KLK14Q9P0G3 267 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 VPS28Q9UK41 221 aa14.24□□□□□ -0.13
RABGGTA-220ENST00000560998 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 TRIM49D1C9J1S8 452 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 TREHO43280 583 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 BMP10O95393 424 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 EIF2S1P05198 315 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 OCM2P0CE71 109 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 OCMP0CE72 109 aaPredicted RBP14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 KITP10721 976 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 KCNE1P15382 129 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 TMED10P49755 219 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 TXNL4AP83876 142 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 FSCBQ5H9T9 825 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 ELMSAN1Q6PJG2 1045 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 CHERPQ8IWX8 916 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 CRYBG2Q8N1P7 616 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 PQLC3Q8N755 202 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 PLD5Q8N7P1 536 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 TERB1Q8NA31 727 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 TBCBQ99426 244 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 EBF4Q9BQW3 602 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 MECRQ9BV79 373 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 B3GNT5Q9BYG0 378 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 GDAP2Q9NXN4 497 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 SELENONQ9NZV5 590 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 MARCOQ9UEW3 520 aaPredicted RBP14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 XPO7Q9UIA9 1087 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 GOLGA8TH3BQL2 631 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 SPTLC1O15269 473 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 H6PDO95479 791 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 MYL3P08590 195 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 PDGFRBP09619 1106 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 CCDC130P13994 396 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 S100A1P23297 94 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 GNL1P36915 607 aaPredicted RBP14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 NRLP54845 237 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 MRPS5P82675 430 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 KCNC4Q03721 635 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 BST2Q10589 180 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 DPYSQ14117 519 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 TCHHL1Q5QJ38 904 aaPredicted RBP14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 DCDC5Q6ZRR9 648 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 CDHR3Q6ZTQ4 885 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 DENND5BQ6ZUT9 1274 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 ANKRD52Q8NB46 1076 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 HIPK4Q8NE63 616 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 DDHD1Q8NEL9 900 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 ZNF560Q96MR9 790 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms