RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 RHOQP17081 205 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 GLDCP23378 1020 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 CCNCP24863 283 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 ZNF135P52742 658 aaPredicted RBP11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 PCSK7Q16549 785 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 C9orf50Q5SZB4 431 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 ZNF697Q5TEC3 545 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 NUGGCQ68CJ6 796 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 FOXR1Q6PIV2 292 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 IPMKQ8NFU5 416 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 ARNTL2Q8WYA1 636 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 MAML1Q92585 1016 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 CLP1Q92989 425 aaKnown RBP11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 MYRFLQ96LU7 910 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 PRICKLE1Q96MT3 831 aaPredicted RBP11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 EBNA1BP2Q99848 306 aaKnown RBP11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 GBA3Q9H227 469 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 TMEM248Q9NWD8 314 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 AGO1Q9UL18 857 aaKnown RBP11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 TMEM120BA0PK00 339 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 MATN3O15232 486 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 PMPCBO75439 489 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 NEBLO76041 1014 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 OAS1P00973 400 aaKnown RBP11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 F11P03951 625 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 LSP1P33241 339 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 MMP13P45452 471 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 SMAD3P84022 425 aaKnown RBP11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 POLD3Q15054 466 aaPredicted RBP11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 LRRC8BQ6P9F7 803 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 C4orf22Q6V702 233 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 RBM23Q86U06 439 aaKnown RBP11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 PDZD8Q8NEN9 1154 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 OR7D4Q8NG98 312 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 CORO1BQ9BR76 489 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 ACSS3Q9H6R3 686 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 IL21Q9HBE4 155 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 NT5MQ9NPB1 228 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 COMMD8Q9NX08 183 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 ZNF212Q9UDV6 495 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 RAD54BQ9Y620 910 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 IGLV3-10A0A075B6K4 115 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 GOLGA8TH3BQL2 631 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 TCEA3O75764 348 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 AP2A1O95782 977 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 LRG1P02750 347 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 HDCP19113 662 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 BMPR1AP36894 532 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 MSH2P43246 934 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 SARNPP82979 210 aaKnown RBP11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 RING1Q06587 406 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 SNX30Q5VWJ9 437 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 AFMIDQ63HM1 303 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 TAX1BP1Q86VP1 789 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 RNF135Q8IUD6 432 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 LZTR1Q8N653 840 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 KREMEN2Q8NCW0 462 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 GDAP1Q8TB36 358 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 ATP2A3Q93084 1043 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 STAMBPL1Q96FJ0 436 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 ZNF778Q96MU6 729 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 SP110Q9HB58 689 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 PPARGC1AQ9UBK2 798 aaKnown RBP11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 CPQQ9Y646 472 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 PRUNE2Q8WUY3 3088 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 LINC01553A4QN01 128 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 SDR42E2A6NKP2 422 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 GRM6O15303 877 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 RAMP2O60895 175 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 SHOX2O60902 331 aaPredicted RBP11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 PEX11BO96011 259 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 C1QAP02745 245 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 MYL4P12829 197 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 CHRNA4P43681 627 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 COG7P83436 770 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 NRG1Q02297 640 aaPredicted RBP11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 BMPR2Q13873 1038 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 IHHQ14623 411 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 KCTD11Q693B1 232 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 PSRC1Q6PGN9 363 aaPredicted RBP11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 UMODL1-AS1Q8N2C9 162 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 DCAKDQ8WVC6 231 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 MFSD3Q96ES6 412 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 ZFRQ96KR1 1074 aaKnown RBP11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 CYTH2Q99418 400 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 PAIP2Q9BPZ3 127 aaKnown RBP11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 SPON2Q9BUD6 331 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 KLF16Q9BXK1 252 aaPredicted RBP11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 RXFP1Q9HBX9 757 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 XAB2Q9HCS7 855 aaKnown RBP11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 CHRAC1Q9NRG0 131 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 PSD3Q9NYI0 1048 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 PLK2Q9NYY3 685 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 FNIP2Q9P278 1114 aa11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 PSMC3IPQ9P2W1 217 aaPredicted RBP11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 HBS1LQ9Y450 684 aaKnown RBP11.09□□□□□ -0.63
SNRPA1-211ENST00000560433 C2orf71A6NGG8 1288 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 DRGXA6NNA5 263 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 CCR2P41597 374 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 SLC11A2P49281 568 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms