RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 OLA1Q9NTK5 396 aaKnown RBP6.04□□□□□ -1.44
MARK3-220ENST00000560417 IRAK4Q9NWZ3 460 aa6.04□□□□□ -1.44
MARK3-220ENST00000560417 AASSQ9UDR5 926 aa6.04□□□□□ -1.44
MARK3-220ENST00000560417 FBXO4Q9UKT5 387 aa6.04□□□□□ -1.44
MARK3-220ENST00000560417 ARHGEF17Q96PE2 2063 aaPredicted RBP6.03□□□□□ -1.44
MARK3-220ENST00000560417 WDR33Q9C0J8 1336 aaKnown RBP6.03□□□□□ -1.44
MARK3-220ENST00000560417 KDM3AQ9Y4C1 1321 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 TCRBV7S3A2A0A539 114 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 HMGB1P1B2RPK0 211 aaPredicted RBP6.03□□□□□ -1.44
MARK3-220ENST00000560417 RNF8O76064 485 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 WNT1P04628 370 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 URODP06132 367 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 FCGR2AP12318 317 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 TFEBP19484 476 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 EPHA8P29322 1005 aaPredicted RBP6.03□□□□□ -1.44
MARK3-220ENST00000560417 DCAF7P61962 342 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 HSF1Q00613 529 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 CFHR1Q03591 330 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 PGM5Q15124 567 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 EARS2Q5JPH6 523 aaKnown RBP6.03□□□□□ -1.44
MARK3-220ENST00000560417 FAM69AQ5T7M9 428 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 FBXO42Q6P3S6 717 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 SLC22A25Q6T423 547 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 UBE2Q1Q7Z7E8 422 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 CNOT9Q92600 299 aaKnown RBP6.03□□□□□ -1.44
MARK3-220ENST00000560417 KAT2AQ92830 837 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 C5orf34Q96MH7 638 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 FRG2BQ96QU4 278 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 LBHD1Q9BQE6 289 aaPredicted RBP6.03□□□□□ -1.44
MARK3-220ENST00000560417 ZNHIT2Q9UHR6 403 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 TNFSF13BQ9Y275 285 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 CLDN16Q9Y5I7 305 aa6.03□□□□□ -1.44
MARK3-220ENST00000560417 A0A1W2PPH5 198 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 A0A1W2PQM1 296 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 TMEM247A6NEH6 219 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 TSPAN4O14817 238 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 USO1O60763 962 aaKnown RBP6.02□□□□□ -1.45
MARK3-220ENST00000560417 USP12O75317 370 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 STAT1P42224 750 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 PAFAH1B1P43034 410 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 PTPN9P43378 593 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 CCR9P51686 369 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 SLC12A2P55011 1212 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 RPE65Q16518 533 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 FBXO43Q4G163 708 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 C17orf99Q6UX52 265 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 ZNF66Q6ZN08 573 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 CHD1LQ86WJ1 897 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 TMEM217Q8N7C4 229 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 WIPF2Q8TF74 440 aaPredicted RBP6.02□□□□□ -1.45
MARK3-220ENST00000560417 UCMAQ8WVF2 138 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 DPF1Q92782 380 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 NR1H4Q96RI1 486 aaPredicted RBP6.02□□□□□ -1.45
MARK3-220ENST00000560417 PIMREGQ9BSJ6 248 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.02□□□□□ -1.45
MARK3-220ENST00000560417 MOV10Q9HCE1 1003 aaKnown RBP6.02□□□□□ -1.45
MARK3-220ENST00000560417 BLOC1S4Q9NUP1 217 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 ICKQ9UPZ9 632 aa6.02□□□□□ -1.45
MARK3-220ENST00000560417 OR6C68A6NDL8 312 aa6.01□□□□□ -1.45
MARK3-220ENST00000560417 CXorf65A6NEN9 183 aa6.01□□□□□ -1.45
MARK3-220ENST00000560417 C2CD4BA6NLJ0 364 aa6.01□□□□□ -1.45
MARK3-220ENST00000560417 TNFSF14O43557 240 aa6.01□□□□□ -1.45
MARK3-220ENST00000560417 HBP1O60381 514 aa6.01□□□□□ -1.45
MARK3-220ENST00000560417 PRKCGP05129 697 aa6.01□□□□□ -1.45
MARK3-220ENST00000560417 BDNFP23560 247 aa6.01□□□□□ -1.45
MARK3-220ENST00000560417 C5orf22Q49AR2 442 aa6.01□□□□□ -1.45
MARK3-220ENST00000560417 STRIP1Q5VSL9 837 aa6.01□□□□□ -1.45
MARK3-220ENST00000560417 FAM171A1Q5VUB5 890 aa6.01□□□□□ -1.45
MARK3-220ENST00000560417 NEK10Q6ZWH5 1172 aa6.01□□□□□ -1.45
MARK3-220ENST00000560417 TMTC3Q6ZXV5 915 aa6.01□□□□□ -1.45
MARK3-220ENST00000560417 PTF1AQ7RTS3 328 aa6.01□□□□□ -1.45
MARK3-220ENST00000560417 PLD5Q8N7P1 536 aa6.01□□□□□ -1.45
MARK3-220ENST00000560417 KCND2Q9NZV8 630 aa6.01□□□□□ -1.45
MARK3-220ENST00000560417 FBXO9Q9UK97 447 aaPredicted RBP6.01□□□□□ -1.45
MARK3-220ENST00000560417 COX11Q9Y6N1 276 aa6.01□□□□□ -1.45
MARK3-220ENST00000560417 TDRD9Q8NDG6 1382 aaKnown RBP6.01□□□□□ -1.45
MARK3-220ENST00000560417 WDR17Q8IZU2 1322 aa6□□□□□ -1.45
MARK3-220ENST00000560417 CYP2D7A0A087X1C5 515 aa6□□□□□ -1.45
MARK3-220ENST00000560417 C17orf113A0A1B0GUU1 675 aa6□□□□□ -1.45
MARK3-220ENST00000560417 PGPEP1LA6NFU8 196 aa6□□□□□ -1.45
MARK3-220ENST00000560417 MANSC4A6NHS7 340 aaPredicted RBP6□□□□□ -1.45
MARK3-220ENST00000560417 NEURL1O76050 574 aa6□□□□□ -1.45
MARK3-220ENST00000560417 DDAH2O95865 285 aa6□□□□□ -1.45
MARK3-220ENST00000560417 CD72P21854 359 aa6□□□□□ -1.45
MARK3-220ENST00000560417 KRTAP15-1Q3LI76 137 aa6□□□□□ -1.45
MARK3-220ENST00000560417 ZNF667Q5HYK9 610 aa6□□□□□ -1.45
MARK3-220ENST00000560417 WDR78Q5VTH9 848 aa6□□□□□ -1.45
MARK3-220ENST00000560417 MZT2BQ6NZ67 158 aa6□□□□□ -1.45
MARK3-220ENST00000560417 PRIMA1Q86XR5 153 aa6□□□□□ -1.45
MARK3-220ENST00000560417 ANKRD52Q8NB46 1076 aa6□□□□□ -1.45
MARK3-220ENST00000560417 HDAC7Q8WUI4 952 aa6□□□□□ -1.45
MARK3-220ENST00000560417 SLC25A18Q9H1K4 315 aa6□□□□□ -1.45
MARK3-220ENST00000560417 RIOX1Q9H6W3 641 aa6□□□□□ -1.45
MARK3-220ENST00000560417 VEZTQ9HBM0 779 aa6□□□□□ -1.45
MARK3-220ENST00000560417 ZNF304Q9HCX3 659 aa6□□□□□ -1.45
MARK3-220ENST00000560417 TERF2IPQ9NYB0 399 aa6□□□□□ -1.45
MARK3-220ENST00000560417 TAS2R10Q9NYW0 307 aa6□□□□□ -1.45
MARK3-220ENST00000560417 TBC1D14Q9P2M4 693 aa6□□□□□ -1.45
MARK3-220ENST00000560417 ORC3Q9UBD5 711 aaPredicted RBP6□□□□□ -1.45
MARK3-220ENST00000560417 NLKQ9UBE8 527 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms