RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 GABBR1Q9UBS5 961 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 STK39Q9UEW8 545 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 SUSD2Q9UGT4 822 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 RIMS3Q9UJD0 308 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 PTBP2Q9UKA9 531 aaKnown RBP6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 PCDHB2Q9Y5E7 798 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 TAF1P21675 1872 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 STRCQ7RTU9 1775 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 FRMPD2Q68DX3 1309 aaPredicted RBP6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 PRSS51A0A1B0GVH4 220 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 WDR91A4D1P6 747 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 PRR5-ARHGAP8B1AHC4 643 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 FAM155AB1AL88 458 aaPredicted RBP6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 ALG1L2C9J202 215 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 GOLGA8TH3BQL2 631 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 MEIS2O14770 477 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 MSH4O15457 936 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 KCNQ2O43526 872 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 DKC1O60832 514 aaKnown RBP eCLIP6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 SLITRK3O94933 977 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 FBXO21O94952 628 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 KRT1P04264 644 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 SERPINB2P05120 415 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 BPGMP07738 259 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 C6orf222P0C671 652 aaPredicted RBP6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 POLR2MP0CAP2 368 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 PABPC1P11940 636 aaKnown RBP6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 BMP3P12645 472 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 CPEP16870 476 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 PRKCHP24723 683 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 CRHR1P34998 444 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 SERPINB6P35237 376 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 HALP42357 657 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 NSFP46459 744 aaKnown RBP6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 TAS2R40P59535 323 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 COG7P83436 770 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 ARHGAP8P85298 464 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 TMPRSS15P98073 1019 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 KDSRQ06136 332 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 ZBTB17Q13105 803 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 COG2Q14746 738 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 HERC3Q15034 1050 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 INAQ16352 499 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 TAZQ16635 292 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 NDUFA5Q16718 116 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 KCTD19Q17RG1 926 aaPredicted RBP6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 ZNF829Q3KNS6 432 aaPredicted RBP6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 KCTD21Q4G0X4 260 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 HSF5Q4G112 596 aaPredicted RBP6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 TFDP3Q5H9I0 405 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 FAXCQ5TGI0 409 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 CYB5RLQ6IPT4 315 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 TMEM53Q6P2H8 277 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 INTS5Q6P9B9 1019 aaKnown RBP6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 C16orf89Q6UX73 402 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 C4orf22Q6V702 233 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 LPCAT2Q7L5N7 544 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 HAUS6Q7Z4H7 955 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 UBE3DQ7Z6J8 389 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 RSPH3Q86UC2 560 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 SLC47A2Q86VL8 602 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 ZNF354CQ86Y25 554 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 NUDCD3Q8IVD9 361 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 ARID3BQ8IVW6 561 aaPredicted RBP6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 CHERPQ8IWX8 916 aaKnown RBP6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 SLC15A3Q8IY34 581 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 PPM1KQ8N3J5 372 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 POU5F2Q8N7G0 328 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 PDPRQ8NCN5 879 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 BVESQ8NE79 360 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 FBXO36Q8NEA4 188 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 PPP1R14CQ8TAE6 165 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 DEPTORQ8TB45 409 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 PIWIL2Q8TC59 973 aaKnown RBP6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 CHPT1Q8WUD6 406 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 PYDC1Q8WXC3 89 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 CPT1BQ92523 772 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 TOP1MTQ969P6 601 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 SERAC1Q96JX3 654 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 CLPTM1LQ96KA5 538 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 ACAP3Q96P50 834 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 GCNAQ96QF7 691 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 OSBPL11Q9BXB4 747 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 TDRD1Q9BXT4 1180 aaKnown RBP6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 MRPL4Q9BYD3 311 aaKnown RBP6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 NYXQ9GZU5 481 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 KLHL25Q9H0H3 589 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 CYP4F12Q9HCS2 524 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 XAB2Q9HCS7 855 aaKnown RBP6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 MRPL40Q9NQ50 206 aaKnown RBP6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 PFDN4Q9NQP4 134 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 MRGBPQ9NV56 204 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 ARHGEF38Q9NXL2 777 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 RRN3Q9NYV6 651 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 ARMCX1Q9P291 453 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 FBXL21Q9UKT6 434 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 DNPEPQ9ULA0 475 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 ARHGAP26Q9UNA1 814 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 MAPRE3Q9UPY8 281 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms