RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 AK5Q9Y6K8 562 aa21.2■□□□□ 0.98
PSEN1-225ENST00000560005 NAV2Q8IVL1 2488 aa21.19■□□□□ 0.98
PSEN1-225ENST00000560005 ATMQ13315 3056 aa21.19■□□□□ 0.98
PSEN1-225ENST00000560005 CBX4O00257 560 aa21.19■□□□□ 0.98
PSEN1-225ENST00000560005 RRP8O43159 456 aaKnown RBP21.19■□□□□ 0.98
PSEN1-225ENST00000560005 TSPAN3O60637 253 aa21.19■□□□□ 0.98
PSEN1-225ENST00000560005 CD27P26842 260 aa21.19■□□□□ 0.98
PSEN1-225ENST00000560005 ZNF394Q53GI3 561 aa21.19■□□□□ 0.98
PSEN1-225ENST00000560005 PHF13Q86YI8 300 aaPredicted RBP21.19■□□□□ 0.98
PSEN1-225ENST00000560005 DENND1CQ8IV53 801 aa21.19■□□□□ 0.98
PSEN1-225ENST00000560005 ZNF366Q8N895 744 aa21.19■□□□□ 0.98
PSEN1-225ENST00000560005 SLC4A11Q8NBS3 891 aa21.19■□□□□ 0.98
PSEN1-225ENST00000560005 LSM14AQ8ND56 463 aaKnown RBP21.19■□□□□ 0.98
PSEN1-225ENST00000560005 DDI1Q8WTU0 396 aa21.19■□□□□ 0.98
PSEN1-225ENST00000560005 HEXIM2Q96MH2 286 aaKnown RBP21.19■□□□□ 0.98
PSEN1-225ENST00000560005 HNRNPABQ99729 332 aaKnown RBP21.19■□□□□ 0.98
PSEN1-225ENST00000560005 DCLK3Q9C098 648 aa21.19■□□□□ 0.98
PSEN1-225ENST00000560005 MIS12Q9H081 205 aa21.19■□□□□ 0.98
PSEN1-225ENST00000560005 ACP6Q9NPH0 428 aa21.19■□□□□ 0.98
PSEN1-225ENST00000560005 UVRAGQ9P2Y5 699 aa21.19■□□□□ 0.98
PSEN1-225ENST00000560005 PCDHGA1Q9Y5H4 931 aa21.19■□□□□ 0.98
PSEN1-225ENST00000560005 ENC1O14682 589 aa21.18■□□□□ 0.98
PSEN1-225ENST00000560005 PAPSS1O43252 624 aaPredicted RBP21.18■□□□□ 0.98
PSEN1-225ENST00000560005 TIMM44O43615 452 aa21.18■□□□□ 0.98
PSEN1-225ENST00000560005 MOCS3O95396 460 aa21.18■□□□□ 0.98
PSEN1-225ENST00000560005 CALB1P05937 261 aa21.18■□□□□ 0.98
PSEN1-225ENST00000560005 RALAP11233 206 aa21.18■□□□□ 0.98
PSEN1-225ENST00000560005 CDH5P33151 784 aaPredicted RBP21.18■□□□□ 0.98
PSEN1-225ENST00000560005 PSEN1P49768 467 aa21.18■□□□□ 0.98
PSEN1-225ENST00000560005 TERF1P54274 439 aa21.18■□□□□ 0.98
PSEN1-225ENST00000560005 SNX16P57768 344 aa21.18■□□□□ 0.98
PSEN1-225ENST00000560005 COG7P83436 770 aa21.18■□□□□ 0.98
PSEN1-225ENST00000560005 C1QBPQ07021 282 aaKnown RBP21.18■□□□□ 0.98
PSEN1-225ENST00000560005 EFEMP1Q12805 493 aa21.18■□□□□ 0.98
PSEN1-225ENST00000560005 DNAJC3Q13217 504 aa21.18■□□□□ 0.98
PSEN1-225ENST00000560005 FNDC3BQ53EP0 1204 aaKnown RBP21.18■□□□□ 0.98
PSEN1-225ENST00000560005 PRAMEF14Q5SWL7 426 aa21.18■□□□□ 0.98
PSEN1-225ENST00000560005 GATAD2AQ86YP4 633 aa21.18■□□□□ 0.98
PSEN1-225ENST00000560005 ORAI3Q9BRQ5 295 aa21.18■□□□□ 0.98
PSEN1-225ENST00000560005 PNPLA8Q9NP80 782 aa21.18■□□□□ 0.98
PSEN1-225ENST00000560005 TAS2R14Q9NYV8 317 aa21.18■□□□□ 0.98
PSEN1-225ENST00000560005 LCMT1Q9UIC8 334 aa21.18■□□□□ 0.98
PSEN1-225ENST00000560005 TFR2Q9UP52 801 aa21.18■□□□□ 0.98
PSEN1-225ENST00000560005 A0A1B0GTQ1 180 aa21.17■□□□□ 0.98
PSEN1-225ENST00000560005 URI1O94763 535 aaPredicted RBP21.17■□□□□ 0.98
PSEN1-225ENST00000560005 MTA2O94776 668 aa21.17■□□□□ 0.98
PSEN1-225ENST00000560005 CYP1A2P05177 515 aa21.17■□□□□ 0.98
PSEN1-225ENST00000560005 ABCB4P21439 1286 aa21.17■□□□□ 0.98
PSEN1-225ENST00000560005 BCAT1P54687 386 aa21.17■□□□□ 0.98
PSEN1-225ENST00000560005 NOMO3P69849 1222 aa21.17■□□□□ 0.98
PSEN1-225ENST00000560005 TARDBPQ13148 414 aaKnown RBP eCLIP21.17■□□□□ 0.98
PSEN1-225ENST00000560005 MCOLN2Q8IZK6 566 aa21.17■□□□□ 0.98
PSEN1-225ENST00000560005 ZNF276Q8N554 614 aa21.17■□□□□ 0.98
PSEN1-225ENST00000560005 SLC35G2Q8TBE7 412 aa21.17■□□□□ 0.98
PSEN1-225ENST00000560005 CYB5D2Q8WUJ1 264 aa21.17■□□□□ 0.98
PSEN1-225ENST00000560005 CYFIP2Q96F07 1278 aa21.17■□□□□ 0.98
PSEN1-225ENST00000560005 TWNKQ96RR1 684 aa21.17■□□□□ 0.98
PSEN1-225ENST00000560005 CDK5RAP1Q96SZ6 601 aaKnown RBP21.17■□□□□ 0.98
PSEN1-225ENST00000560005 SLC2A11Q9BYW1 496 aa21.17■□□□□ 0.98
PSEN1-225ENST00000560005 THAP2Q9H0W7 228 aa21.17■□□□□ 0.98
PSEN1-225ENST00000560005 TMEM245Q9H330 911 aa21.17■□□□□ 0.98
PSEN1-225ENST00000560005 MRPL47Q9HD33 250 aaKnown RBP21.17■□□□□ 0.98
PSEN1-225ENST00000560005 CLIC5Q9NZA1 410 aa21.17■□□□□ 0.98
PSEN1-225ENST00000560005 COL5A1P20908 1838 aaPredicted RBP21.17■□□□□ 0.98
PSEN1-225ENST00000560005 TP53BP1Q12888 1972 aaPredicted RBP21.16■□□□□ 0.98
PSEN1-225ENST00000560005 CAPN9O14815 690 aa21.16■□□□□ 0.98
PSEN1-225ENST00000560005 BUB1O43683 1085 aa21.16■□□□□ 0.98
PSEN1-225ENST00000560005 DFNA5O60443 496 aa21.16■□□□□ 0.98
PSEN1-225ENST00000560005 RFPL3O75679 317 aa21.16■□□□□ 0.98
PSEN1-225ENST00000560005 LDOC1O95751 146 aaPredicted RBP21.16■□□□□ 0.98
PSEN1-225ENST00000560005 DNTTP04053 509 aa21.16■□□□□ 0.98
PSEN1-225ENST00000560005 PRLRP16471 622 aa21.16■□□□□ 0.98
PSEN1-225ENST00000560005 BRD2P25440 801 aaKnown RBP21.16■□□□□ 0.98
PSEN1-225ENST00000560005 C21orf59P57076 290 aa21.16■□□□□ 0.98
PSEN1-225ENST00000560005 RPS14P62263 151 aaKnown RBP21.16■□□□□ 0.98
PSEN1-225ENST00000560005 NAA35Q5VZE5 725 aa21.16■□□□□ 0.98
PSEN1-225ENST00000560005 CPXM2Q8N436 756 aa21.16■□□□□ 0.98
PSEN1-225ENST00000560005 ZNF653Q96CK0 615 aa21.16■□□□□ 0.98
PSEN1-225ENST00000560005 CNDP2Q96KP4 475 aaKnown RBP21.16■□□□□ 0.98
PSEN1-225ENST00000560005 ACE2Q9BYF1 805 aaPredicted RBP21.16■□□□□ 0.98
PSEN1-225ENST00000560005 ADAM22Q9P0K1 906 aa21.16■□□□□ 0.98
PSEN1-225ENST00000560005 CTTNBP2NLQ9P2B4 639 aa21.16■□□□□ 0.98
PSEN1-225ENST00000560005 STRIP2Q9ULQ0 834 aa21.16■□□□□ 0.98
PSEN1-225ENST00000560005 SETSIPP0DME0 302 aa21.15■□□□□ 0.98
PSEN1-225ENST00000560005 C7P10643 843 aa21.15■□□□□ 0.98
PSEN1-225ENST00000560005 HES3Q5TGS1 186 aa21.15■□□□□ 0.98
PSEN1-225ENST00000560005 PAPD7Q5XG87 772 aaKnown RBP21.15■□□□□ 0.98
PSEN1-225ENST00000560005 LCLAT1Q6UWP7 414 aa21.15■□□□□ 0.98
PSEN1-225ENST00000560005 GPR155Q7Z3F1 870 aa21.15■□□□□ 0.98
PSEN1-225ENST00000560005 TPCN2Q8NHX9 752 aa21.15■□□□□ 0.98
PSEN1-225ENST00000560005 SLC6A18Q96N87 628 aa21.15■□□□□ 0.98
PSEN1-225ENST00000560005 ELF4Q99607 663 aaPredicted RBP21.15■□□□□ 0.98
PSEN1-225ENST00000560005 L2HGDHQ9H9P8 463 aa21.15■□□□□ 0.98
PSEN1-225ENST00000560005 HESX1Q9UBX0 185 aa21.15■□□□□ 0.98
PSEN1-225ENST00000560005 CNOT8Q9UFF9 292 aaKnown RBP21.15■□□□□ 0.98
PSEN1-225ENST00000560005 USP3Q9Y6I4 520 aa21.15■□□□□ 0.98
PSEN1-225ENST00000560005 SCINQ9Y6U3 715 aa21.15■□□□□ 0.98
PSEN1-225ENST00000560005 CYSRT1A8MQ03 144 aa21.14■□□□□ 0.97
PSEN1-225ENST00000560005 VILLO15195 856 aa21.14■□□□□ 0.97
PSEN1-225ENST00000560005 PALMO75781 387 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms