RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 PRPF6O94906 941 aaKnown RBP9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 TNNC2P02585 160 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 RPLP0P05388 317 aaKnown RBP9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 GOT1P17174 413 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 SLC8A1P32418 973 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 MAP3K7CLP57077 242 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 CCL7P80098 99 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 ART3Q13508 389 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 MCM6Q14566 821 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 TMEM119Q4V9L6 283 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 CRTC2Q53ET0 693 aaPredicted RBP9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 PAQR9Q6ZVX9 377 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 Q71RC1 249 aaPredicted RBP9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 GPRIN1Q7Z2K8 1008 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 MMAAQ8IVH4 418 aaKnown RBP9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 SLC35F3Q8IY50 421 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 ZMIZ2Q8NF64 920 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 CENPTQ96BT3 561 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 C19orf60Q96EN9 201 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 SMARCD1Q96GM5 515 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 MYOCQ99972 504 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 BOCQ9BWV1 1114 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 CHST11Q9NPF2 352 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 ABCB8Q9NUT2 735 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 CYTH4Q9UIA0 394 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 RASAL2Q9UJF2 1139 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 AGO1Q9UL18 857 aaKnown RBP9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 PADI4Q9UM07 663 aa9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 KLF2Q9Y5W3 355 aaPredicted RBP9.67□□□□□ -0.86
PPP1R3E-204ENST00000559942 FLNAP21333 2647 aaKnown RBP9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 A0A1W2PQM1 296 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 AQP9O43315 295 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 RAD1O60671 282 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 RNGTTO60942 597 aaKnown RBP9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 SIN3BO75182 1162 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 TACC1O75410 805 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 CLSTN1O94985 981 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 CCDC130P13994 396 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 FOSL1P15407 271 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 PSMD8P48556 350 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 TOB1P50616 345 aaPredicted RBP9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 ARSDP51689 593 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 TNNC1P63316 161 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 ZFP36L1Q07352 338 aaKnown RBP9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 WDR72Q3MJ13 1102 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 SETMARQ53H47 684 aaPredicted RBP9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 MBLAC2Q68D91 279 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 ADIPOR2Q86V24 386 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 SFR1Q86XK3 245 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 SDR16C5Q8N3Y7 309 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 CHDHQ8NE62 594 aaPredicted RBP9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 HVCN1Q96D96 273 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 C8orf76Q96K31 380 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 SMOQ99835 787 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 CBWD1Q9BRT8 395 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 SLC2A11Q9BYW1 496 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 CPEB1Q9BZB8 566 aaKnown RBP9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 FOXP1Q9H334 677 aaPredicted RBP9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 FBXO44Q9H4M3 255 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 COMMD8Q9NX08 183 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 TBC1D7Q9P0N9 293 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 LUZP4Q9P127 313 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 NAGPAQ9UK23 515 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 CROTQ9UKG9 612 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 ZNF510Q9Y2H8 683 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 FER1L5A0AVI2 2057 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 NYNRINQ9P2P1 1898 aaKnown RBP9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 NOTCH1P46531 2555 aa9.66□□□□□ -0.86
PPP1R3E-204ENST00000559942 VWA3AA6NCI4 1184 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 H3BM21 787 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 KRT86O43790 486 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 LDHAP00338 332 aaKnown RBP9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 CST3P01034 146 aaPredicted RBP9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 DLDP09622 509 aaKnown RBP9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 HOXD9P28356 352 aaPredicted RBP9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 ABCD1P33897 745 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 EFEMP1Q12805 493 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 VWA2Q5GFL6 755 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 DYMQ7RTS9 669 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 ZNF720Q7Z2F6 126 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 FUKQ8N0W3 1084 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 AADATQ8N5Z0 425 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 TMEM145Q8NBT3 493 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 OR13H1Q8NG92 308 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 STARD8Q92502 1023 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 ELMO3Q96BJ8 720 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 TAAR9Q96RI9 348 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 RANBP9Q96S59 729 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 LRRN3Q9H3W5 708 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 AKAP7Q9P0M2 348 aaPredicted RBP9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 RABGEF1Q9UJ41 708 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 GGA2Q9UJY4 613 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 RPH3AQ9Y2J0 694 aaPredicted RBP9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 PCDHGB6Q9Y5F9 930 aa9.65□□□□□ -0.86
PPP1R3E-204ENST00000559942 CNTRLQ7Z7A1 2325 aa9.65□□□□□ -0.87
PPP1R3E-204ENST00000559942 CSF2P04141 144 aa9.64□□□□□ -0.87
PPP1R3E-204ENST00000559942 ATP5BP06576 529 aaKnown RBP9.64□□□□□ -0.87
PPP1R3E-204ENST00000559942 PABPC1P11940 636 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms