RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 SETMARQ53H47 684 aaPredicted RBP16.07■□□□□ 0.16
AC243562.3-201ENST00000559866 RNF219Q5W0B1 726 aaPredicted RBP16.07■□□□□ 0.16
AC243562.3-201ENST00000559866 CXorf57Q6NSI4 855 aaKnown RBP16.07■□□□□ 0.16
AC243562.3-201ENST00000559866 GCNT7Q6ZNI0 430 aa16.07■□□□□ 0.16
AC243562.3-201ENST00000559866 LSMEM2Q8N112 164 aa16.07■□□□□ 0.16
AC243562.3-201ENST00000559866 IFI44Q8TCB0 444 aa16.07■□□□□ 0.16
AC243562.3-201ENST00000559866 IRGQQ8WZA9 623 aa16.07■□□□□ 0.16
AC243562.3-201ENST00000559866 SPAG5Q96R06 1193 aa16.07■□□□□ 0.16
AC243562.3-201ENST00000559866 DDX50Q9BQ39 737 aaKnown RBP16.07■□□□□ 0.16
AC243562.3-201ENST00000559866 CALN1Q9BXU9 219 aa16.07■□□□□ 0.16
AC243562.3-201ENST00000559866 KDM4CQ9H3R0 1056 aa16.07■□□□□ 0.16
AC243562.3-201ENST00000559866 KLHL11Q9NVR0 708 aa16.07■□□□□ 0.16
AC243562.3-201ENST00000559866 KIAA1257Q9ULG3 409 aa16.07■□□□□ 0.16
AC243562.3-201ENST00000559866 TPX2Q9ULW0 747 aaKnown RBP16.07■□□□□ 0.16
AC243562.3-201ENST00000559866 ENTPD2Q9Y5L3 495 aa16.07■□□□□ 0.16
AC243562.3-201ENST00000559866 RNF225M0QZC1 329 aaPredicted RBP16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 SLC31A1O15431 190 aa16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 EFSO43281 561 aa16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 MAGEC1O60732 1142 aa16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 CTSLP07711 333 aa16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 TACR2P21452 398 aa16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 C1QBPQ07021 282 aaKnown RBP16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 NFATC3Q12968 1075 aa16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 CLN3Q13286 438 aa16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 PIP5KL1Q5T9C9 394 aa16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 SYPL2Q5VXT5 272 aa16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 CRTC1Q6UUV9 634 aa16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 LCLAT1Q6UWP7 414 aa16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 Q6ZVU0 165 aa16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 CHSY1Q86X52 802 aa16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 SMYD4Q8IYR2 804 aaPredicted RBP16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 ALG14Q96F25 216 aa16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 THSD1Q9NS62 852 aa16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 NLGN3Q9NZ94 848 aa16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 PPM1HQ9ULR3 514 aa16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 ZFR2Q9UPR6 939 aaKnown RBP16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 TLR6Q9Y2C9 796 aa16.06■□□□□ 0.16
AC243562.3-201ENST00000559866 A0A1W2PQU0 124 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 CDRT15L2A8MXV6 281 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 K7ESM1 405 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 M0QYV0 167 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 ZNF202O95125 648 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 MOCS3O95396 460 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 GP1BAP07359 652 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 BRD2P25440 801 aaKnown RBP16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 PDX1P52945 283 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 LRMPQ12912 555 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 SRSF6Q13247 344 aaKnown RBP16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 ZNF284Q2VY69 593 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 LINC00303Q3SY05 128 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 OR6B2Q6IFH4 312 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 GUSBP11Q6P575 273 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 IGF2-ASQ6U949 168 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 CCAR2Q8N163 923 aaKnown RBP16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 MAPK15Q8TD08 544 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 OR8D1Q8WZ84 308 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 ARRDC3Q96B67 414 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 SLC46A1Q96NT5 459 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 SERPINB11Q96P15 392 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 PRMT1Q99873 361 aaKnown RBP16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 TJP2Q9UDY2 1190 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 COQ4Q9Y3A0 265 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 SCN8AQ9UQD0 1980 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 PTPN13Q12923 2485 aa16.05■□□□□ 0.16
AC243562.3-201ENST00000559866 NUDT1P36639 197 aa16.04■□□□□ 0.16
AC243562.3-201ENST00000559866 CSRP3P50461 194 aa16.04■□□□□ 0.16
AC243562.3-201ENST00000559866 FKBP3Q00688 224 aaKnown RBP16.04■□□□□ 0.16
AC243562.3-201ENST00000559866 CENPCQ03188 943 aa16.04■□□□□ 0.16
AC243562.3-201ENST00000559866 STILQ15468 1287 aa16.04■□□□□ 0.16
AC243562.3-201ENST00000559866 CDKN3Q16667 212 aa16.04■□□□□ 0.16
AC243562.3-201ENST00000559866 ZC3H12AQ5D1E8 599 aaKnown RBP16.04■□□□□ 0.16
AC243562.3-201ENST00000559866 KAT5Q92993 513 aa16.04■□□□□ 0.16
AC243562.3-201ENST00000559866 GOLPH3LQ9H4A5 285 aa16.04■□□□□ 0.16
AC243562.3-201ENST00000559866 PREBQ9HCU5 417 aa16.04■□□□□ 0.16
AC243562.3-201ENST00000559866 ARMCX3Q9UH62 379 aaPredicted RBP16.04■□□□□ 0.16
AC243562.3-201ENST00000559866 KLF15Q9UIH9 416 aa16.04■□□□□ 0.16
AC243562.3-201ENST00000559866 SCAMP1O15126 338 aa16.03■□□□□ 0.16
AC243562.3-201ENST00000559866 ATP9BO43861 1147 aa16.03■□□□□ 0.16
AC243562.3-201ENST00000559866 BNIP3LO60238 219 aa16.03■□□□□ 0.16
AC243562.3-201ENST00000559866 PAEPP09466 180 aa16.03■□□□□ 0.16
AC243562.3-201ENST00000559866 CETN1Q12798 172 aa16.03■□□□□ 0.16
AC243562.3-201ENST00000559866 NNTQ13423 1086 aa16.03■□□□□ 0.16
AC243562.3-201ENST00000559866 FGL2Q14314 439 aa16.03■□□□□ 0.16
AC243562.3-201ENST00000559866 PERM1Q5SV97 790 aa16.03■□□□□ 0.16
AC243562.3-201ENST00000559866 TPRG1LQ5T0D9 272 aa16.03■□□□□ 0.16
AC243562.3-201ENST00000559866 ZNF658Q5TYW1 1059 aaPredicted RBP16.03■□□□□ 0.16
AC243562.3-201ENST00000559866 SEL1L3Q68CR1 1132 aa16.03■□□□□ 0.16
AC243562.3-201ENST00000559866 FOXR1Q6PIV2 292 aa16.03■□□□□ 0.16
AC243562.3-201ENST00000559866 TMEM270Q6UE05 265 aa16.03■□□□□ 0.16
AC243562.3-201ENST00000559866 CCDC81Q6ZN84 652 aa16.03■□□□□ 0.16
AC243562.3-201ENST00000559866 GTPBP4Q9BZE4 634 aaKnown RBP16.03■□□□□ 0.16
AC243562.3-201ENST00000559866 GPR27Q9NS67 375 aa16.03■□□□□ 0.16
AC243562.3-201ENST00000559866 IL17BQ9UHF5 180 aa16.03■□□□□ 0.16
AC243562.3-201ENST00000559866 PCDHB4Q9Y5E5 795 aa16.03■□□□□ 0.16
AC243562.3-201ENST00000559866 TERTO14746 1132 aaKnown RBP16.02■□□□□ 0.16
AC243562.3-201ENST00000559866 MCF2LO15068 1137 aa16.02■□□□□ 0.16
AC243562.3-201ENST00000559866 FBXO21O94952 628 aa16.02■□□□□ 0.16
AC243562.3-201ENST00000559866 SMC2O95347 1197 aa16.02■□□□□ 0.16
AC243562.3-201ENST00000559866 IGLV3-25P01717 112 aa16.02■□□□□ 0.16
AC243562.3-201ENST00000559866 GGCXP38435 758 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms