RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 SLC39A10Q9ULF5 831 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 SOX13Q9UN79 622 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 GLTPD2A6NH11 291 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 DFFAO00273 331 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 PHGDHO43175 533 aaKnown RBP10.24□□□□□ -0.77
LRRC28-216ENST00000559819 MAP3K13O43283 966 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 ZBTB14O43829 449 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 NEBLO76041 1014 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 KLHL2O95198 593 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 THP07101 528 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 CHRNGP07510 517 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 BDNFP23560 247 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 GRK2P25098 689 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 BRCC3P46736 316 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 GLRBP48167 497 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 TRMT5Q32P41 509 aaKnown RBP10.24□□□□□ -0.77
LRRC28-216ENST00000559819 CCDC153Q494R4 210 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 CLEC14AQ86T13 490 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 OR6Y1Q8NGX8 325 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 HDAC11Q96DB2 347 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 ZNF419Q96HQ0 510 aaPredicted RBP10.24□□□□□ -0.77
LRRC28-216ENST00000559819 APBA2Q99767 749 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 SIKE1Q9BRV8 207 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 UNKQ9C0B0 810 aaKnown RBP10.24□□□□□ -0.77
LRRC28-216ENST00000559819 SIK2Q9H0K1 926 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 COG4Q9H9E3 785 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 ZNF212Q9UDV6 495 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 ADAM28Q9UKQ2 775 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 CORO1CQ9ULV4 474 aaPredicted RBP10.24□□□□□ -0.77
LRRC28-216ENST00000559819 G3BP2Q9UN86 482 aaKnown RBP10.24□□□□□ -0.77
LRRC28-216ENST00000559819 DOCK3Q8IZD9 2030 aa10.24□□□□□ -0.77
LRRC28-216ENST00000559819 GOLGA8QA0A0J9YX86 632 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 GOLGA8OA6NCC3 632 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 ARL5CA6NH57 179 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 F8W8V4 182 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 GOLGA8NF8WBI6 632 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 TK2O00142 265 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 MAP3K7O43318 606 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 DCXO43602 365 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 MT-CYBP00156 380 aaPredicted RBP10.23□□□□□ -0.77
LRRC28-216ENST00000559819 ATP5BP06576 529 aaKnown RBP10.23□□□□□ -0.77
LRRC28-216ENST00000559819 MPSTP25325 297 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 LHX1P48742 406 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 CXCR3P49682 368 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 COPAP53621 1224 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 MRPS6P82932 125 aaKnown RBP10.23□□□□□ -0.77
LRRC28-216ENST00000559819 PURAQ00577 322 aaKnown RBP10.23□□□□□ -0.77
LRRC28-216ENST00000559819 ZNF460Q14592 562 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 C6orf163Q5TEZ5 329 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 TMEM154Q6P9G4 183 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 ZSCAN18Q8TBC5 510 aaPredicted RBP10.23□□□□□ -0.77
LRRC28-216ENST00000559819 PYDC1Q8WXC3 89 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 VPS39Q96JC1 886 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 TEKT5Q96M29 485 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 OR52B2Q96RD2 323 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 TSPAN18Q96SJ8 248 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 EPAS1Q99814 870 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 CDH19Q9H159 772 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 PCDHB12Q9Y5F1 795 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 CENPFP49454 3210 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 ALOX15P16050 662 aaPredicted RBP10.23□□□□□ -0.77
LRRC28-216ENST00000559819 HCAR3P49019 387 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 PGFP49763 221 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 AIF1P55008 147 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 KLC1Q07866 573 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 CUL3Q13618 768 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 FSCN1Q16658 493 aaKnown RBP10.23□□□□□ -0.77
LRRC28-216ENST00000559819 ITPRIPL1Q6GPH6 555 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 AGMOQ6ZNB7 445 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 FRMD7Q6ZUT3 714 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 RAPH1Q70E73 1250 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 SPATA6LQ8N4H0 392 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 TDRD5Q8NAT2 981 aaKnown RBP10.23□□□□□ -0.77
LRRC28-216ENST00000559819 PPFIBP2Q8ND30 876 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 HIPK4Q8NE63 616 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 SCAMP5Q8TAC9 235 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 DQX1Q8TE96 717 aaKnown RBP10.23□□□□□ -0.77
LRRC28-216ENST00000559819 CCDC124Q96CT7 223 aaKnown RBP10.23□□□□□ -0.77
LRRC28-216ENST00000559819 PGAP3Q96FM1 320 aaPredicted RBP10.23□□□□□ -0.77
LRRC28-216ENST00000559819 GATA5Q9BWX5 397 aaPredicted RBP10.23□□□□□ -0.77
LRRC28-216ENST00000559819 C1orf21Q9H246 121 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 STN1Q9H668 368 aaKnown RBP10.23□□□□□ -0.77
LRRC28-216ENST00000559819 TASP1Q9H6P5 420 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 NMRAL1Q9HBL8 299 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 PACSIN3Q9UKS6 424 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 ANGPTL2Q9UKU9 493 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 CDH9Q9ULB4 789 aa10.23□□□□□ -0.77
LRRC28-216ENST00000559819 SHROOM3Q8TF72 1996 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 NEMP1O14524 444 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 NCAM2O15394 837 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 POMCP01189 267 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 MPOP05164 745 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 ITGAXP20702 1163 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 MPP1Q00013 466 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 POU6F1Q14863 301 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 CFAP157Q5JU67 520 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 EPGNQ6UW88 154 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 KDELC2Q7Z4H8 507 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 SLC41A1Q8IVJ1 513 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 DPF3Q92784 378 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms