RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 PRPF39Q86UA1 669 aaKnown RBP13.47□□□□□ -0.25
TPM1-220ENST00000559556 OR52K2Q8NGK3 314 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 FAM81BQ96LP2 452 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 RPRD1AQ96P16 312 aaPredicted RBP13.47□□□□□ -0.25
TPM1-220ENST00000559556 PPP1R9BQ96SB3 815 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 CPXM1Q96SM3 734 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 FEM1AQ9BSK4 669 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 SRRTQ9BXP5 876 aaKnown RBP13.47□□□□□ -0.25
TPM1-220ENST00000559556 OR51B4Q9Y5P0 310 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 MCF2LO15068 1137 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 JUPP14923 745 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 ABCG1P45844 678 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 IRAK1P51617 712 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 CLDN6P56747 220 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 STX17P56962 302 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 CNTN1Q12860 1018 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 AUHQ13825 339 aaKnown RBP13.46□□□□□ -0.25
TPM1-220ENST00000559556 RTP5Q14D33 572 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 C5orf22Q49AR2 442 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 EFHC1Q5JVL4 640 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 SMYD5Q6GMV2 418 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 Q6ZVU0 165 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 DEFB106AQ8N104 65 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 WDTC1Q8N5D0 677 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 SH2D3CQ8N5H7 860 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 PIP4K2CQ8TBX8 421 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 SHC3Q92529 594 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 CRELD1Q96HD1 420 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 PPP1R13BQ96KQ4 1090 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 NRSN2Q9GZP1 204 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 PREBQ9HCU5 417 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 APEX2Q9UBZ4 518 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 VANGL2Q9ULK5 521 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 PPM1HQ9ULR3 514 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 PCDHGC3Q9UN70 934 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 HS3ST2Q9Y278 367 aa13.46□□□□□ -0.25
TPM1-220ENST00000559556 NAV2Q8IVL1 2488 aa13.46□□□□□ -0.26
TPM1-220ENST00000559556 SPTA1P02549 2419 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 MAST4O15021 2626 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 SYNJ2BP-COX16A0A087WUM0 186 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 C1QTNF3-AMACRE9PGA6 284 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 BIN1O00499 593 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 CLDN11O75508 207 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 DAB1O75553 588 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 CKMT2P17540 419 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 MAT2AP31153 395 aaKnown RBP13.45□□□□□ -0.26
TPM1-220ENST00000559556 TAS2R38P59533 333 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 DLG2Q15700 870 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 ACCSLQ4AC99 568 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 GJB7Q6PEY0 223 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 OLFML1Q6UWY5 402 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 FAM183BPQ6ZVS7 135 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 SLC26A9Q7LBE3 791 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 CACTIN-AS1Q8N1I8 211 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 RFFLQ8WZ73 363 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 RNF34Q969K3 372 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 DCBLD2Q96PD2 775 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 CRACR2AQ9BSW2 395 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 COX16Q9P0S2 106 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 VPS28Q9UK41 221 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 TBC1D30Q9Y2I9 924 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 HS3ST4Q9Y661 456 aa13.45□□□□□ -0.26
TPM1-220ENST00000559556 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.44□□□□□ -0.26
TPM1-220ENST00000559556 GTPBP10A4D1E9 387 aaKnown RBP13.44□□□□□ -0.26
TPM1-220ENST00000559556 PRAMEF26H0Y7S4 382 aa13.44□□□□□ -0.26
TPM1-220ENST00000559556 TLX3O43711 291 aaPredicted RBP13.44□□□□□ -0.26
TPM1-220ENST00000559556 RNGTTO60942 597 aaKnown RBP13.44□□□□□ -0.26
TPM1-220ENST00000559556 PAGE1O75459 146 aa13.44□□□□□ -0.26
TPM1-220ENST00000559556 GRAP2O75791 330 aa13.44□□□□□ -0.26
TPM1-220ENST00000559556 FGFR1OPO95684 399 aaKnown RBP13.44□□□□□ -0.26
TPM1-220ENST00000559556 SRCP12931 536 aa13.44□□□□□ -0.26
TPM1-220ENST00000559556 SLC9A1P19634 815 aa13.44□□□□□ -0.26
TPM1-220ENST00000559556 ACP1P24666 158 aa13.44□□□□□ -0.26
TPM1-220ENST00000559556 EIF2S3P41091 472 aaKnown RBP13.44□□□□□ -0.26
TPM1-220ENST00000559556 TARDBPQ13148 414 aaKnown RBP eCLIP13.44□□□□□ -0.26
TPM1-220ENST00000559556 ZNF177Q13360 481 aaPredicted RBP13.44□□□□□ -0.26
TPM1-220ENST00000559556 STAT4Q14765 748 aa13.44□□□□□ -0.26
TPM1-220ENST00000559556 ARHGAP44Q17R89 818 aa13.44□□□□□ -0.26
TPM1-220ENST00000559556 PROX2Q3B8N5 592 aa13.44□□□□□ -0.26
TPM1-220ENST00000559556 PIP5KL1Q5T9C9 394 aa13.44□□□□□ -0.26
TPM1-220ENST00000559556 OTUD1Q5VV17 481 aaPredicted RBP13.44□□□□□ -0.26
TPM1-220ENST00000559556 C11orf57Q6ZUT1 292 aaPredicted RBP13.44□□□□□ -0.26
TPM1-220ENST00000559556 PASD1Q8IV76 773 aa13.44□□□□□ -0.26
TPM1-220ENST00000559556 TMEM145Q8NBT3 493 aa13.44□□□□□ -0.26
TPM1-220ENST00000559556 SNIP1Q8TAD8 396 aaKnown RBP13.44□□□□□ -0.26
TPM1-220ENST00000559556 NOX5Q96PH1 765 aa13.44□□□□□ -0.26
TPM1-220ENST00000559556 ERBB2P04626 1255 aa13.43□□□□□ -0.26
TPM1-220ENST00000559556 CTSLP07711 333 aa13.43□□□□□ -0.26
TPM1-220ENST00000559556 NOS2P35228 1153 aa13.43□□□□□ -0.26
TPM1-220ENST00000559556 GGCXP38435 758 aa13.43□□□□□ -0.26
TPM1-220ENST00000559556 USP8P40818 1118 aa13.43□□□□□ -0.26
TPM1-220ENST00000559556 CDH4P55283 916 aa13.43□□□□□ -0.26
TPM1-220ENST00000559556 SEMG2Q02383 582 aa13.43□□□□□ -0.26
TPM1-220ENST00000559556 PTPN13Q12923 2485 aa13.43□□□□□ -0.26
TPM1-220ENST00000559556 NME3Q13232 169 aa13.43□□□□□ -0.26
TPM1-220ENST00000559556 POM121L1PQ3SYA9 428 aa13.43□□□□□ -0.26
TPM1-220ENST00000559556 PTPN20Q4JDL3 420 aa13.43□□□□□ -0.26
TPM1-220ENST00000559556 NEK5Q6P3R8 708 aa13.43□□□□□ -0.26
TPM1-220ENST00000559556 GBP6Q6ZN66 633 aa13.43□□□□□ -0.26
TPM1-220ENST00000559556 C14orf80Q86SX3 495 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms