RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 BTN2A3PQ96KV6 586 aa13.24□□□□□ -0.29
SMAD3-207ENST00000558763 CYTH2Q99418 400 aa13.24□□□□□ -0.29
SMAD3-207ENST00000558763 CCDC134Q9H6E4 229 aa13.24□□□□□ -0.29
SMAD3-207ENST00000558763 PPARGC1AQ9UBK2 798 aaKnown RBP13.24□□□□□ -0.29
SMAD3-207ENST00000558763 VANGL2Q9ULK5 521 aa13.24□□□□□ -0.29
SMAD3-207ENST00000558763 DENND4CQ5VZ89 1909 aa13.24□□□□□ -0.29
SMAD3-207ENST00000558763 CXorf49A8MYA2 514 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-207ENST00000558763 RASA4BC9J798 803 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 RASA4O43374 803 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 CNTN5O94779 1100 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 AP2A1O95782 977 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 PEX11BO96011 259 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 APOEP02649 317 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 BRAFP15056 766 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 NFKB1P19838 968 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 CCNCP24863 283 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 SPARCL1Q14515 664 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 ZSCAN26Q16670 478 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 FBXL22Q6P050 247 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 TRMT10BQ6PF06 316 aaKnown RBP13.23□□□□□ -0.29
SMAD3-207ENST00000558763 LEKR1Q6ZMV7 388 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 UMODL1-AS1Q8N2C9 162 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 IGSF8Q969P0 613 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 OXNAD1Q96HP4 312 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-207ENST00000558763 MYRFLQ96LU7 910 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 AGAP3Q96P47 875 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 ZNF317Q96PQ6 595 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-207ENST00000558763 VAT1Q99536 393 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 IL12RB2Q99665 862 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 FERMT1Q9BQL6 677 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 IGFLR1Q9H665 355 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 PIH1D1Q9NWS0 290 aaKnown RBP13.23□□□□□ -0.29
SMAD3-207ENST00000558763 TRHDEQ9UKU6 1024 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 A0A1W2PPM1 405 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 SLC12A8A0AV02 714 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 ZNF840PA6NDX5 716 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 DFFAO00273 331 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 RFPL2O75678 378 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 JCHAINP01591 159 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 LRG1P02750 347 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 KCNQ1P51787 676 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 CRADDP78560 199 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 NR1H3Q13133 447 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 VEPH1Q14D04 833 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 DUSP6Q16828 381 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 CCDC149Q6ZUS6 474 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 ATPAF2Q8N5M1 289 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 BCAS4Q8TDM0 211 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 SLC22A17Q8WUG5 538 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 OVCA2Q8WZ82 227 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 MRRFQ96E11 262 aaKnown RBP13.23□□□□□ -0.29
SMAD3-207ENST00000558763 TMEM248Q9NWD8 314 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 MOCS1Q9NZB8 636 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 MAFFQ9ULX9 164 aa13.23□□□□□ -0.29
SMAD3-207ENST00000558763 DRGXA6NNA5 263 aa13.22□□□□□ -0.29
SMAD3-207ENST00000558763 CPP00450 1065 aa13.22□□□□□ -0.29
SMAD3-207ENST00000558763 GSTA2P09210 222 aa13.22□□□□□ -0.29
SMAD3-207ENST00000558763 RHOQP17081 205 aa13.22□□□□□ -0.29
SMAD3-207ENST00000558763 EPHB3P54753 998 aa13.22□□□□□ -0.29
SMAD3-207ENST00000558763 PLD1Q13393 1074 aa13.22□□□□□ -0.29
SMAD3-207ENST00000558763 TAF12Q16514 161 aa13.22□□□□□ -0.29
SMAD3-207ENST00000558763 PPM1LQ5SGD2 360 aa13.22□□□□□ -0.29
SMAD3-207ENST00000558763 ZNF697Q5TEC3 545 aa13.22□□□□□ -0.29
SMAD3-207ENST00000558763 RAP1GAP2Q684P5 730 aa13.22□□□□□ -0.29
SMAD3-207ENST00000558763 ATP6V0D2Q8N8Y2 350 aa13.22□□□□□ -0.29
SMAD3-207ENST00000558763 PPANQ9NQ55 473 aaKnown RBP13.22□□□□□ -0.29
SMAD3-207ENST00000558763 CASS4Q9NQ75 786 aa13.22□□□□□ -0.29
SMAD3-207ENST00000558763 INTS9Q9NV88 658 aaKnown RBP13.22□□□□□ -0.29
SMAD3-207ENST00000558763 RSPH14Q9UHP6 348 aa13.22□□□□□ -0.29
SMAD3-207ENST00000558763 MTCL1Q9Y4B5 1905 aaKnown RBP13.22□□□□□ -0.29
SMAD3-207ENST00000558763 TMEM265A0A087WTH1 108 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 FAM159BA6NKW6 160 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 CCL16O15467 120 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 TYROBPO43914 113 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 USP12O75317 370 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 ALDH1A2O94788 518 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 HMBSP08397 361 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 CCNB1P14635 433 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 MGAT1P26572 445 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 STX2P32856 288 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 PAPOLAP51003 745 aaKnown RBP13.21□□□□□ -0.29
SMAD3-207ENST00000558763 COG7P83436 770 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 C5orf22Q49AR2 442 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 FAM133BQ5BKY9 247 aaKnown RBP13.21□□□□□ -0.29
SMAD3-207ENST00000558763 TCEAL5Q5H9L2 206 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 KLHDC10Q6PID8 442 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 SH2D5Q6ZV89 423 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 OTOP3Q7RTS5 596 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 TFAP2DQ7Z6R9 452 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 TMEM150AQ86TG1 271 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 GSDMBQ8TAX9 411 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 DENND1AQ8TEH3 1009 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 PPP2R3CQ969Q6 453 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 STAMBPL1Q96FJ0 436 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 TRMT2BQ96GJ1 504 aaKnown RBP13.21□□□□□ -0.29
SMAD3-207ENST00000558763 CCT8L2Q96SF2 557 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 ZYG11BQ9C0D3 744 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 TRABDQ9H4I3 376 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 NSUN3Q9H649 340 aaKnown RBP13.21□□□□□ -0.29
SMAD3-207ENST00000558763 SYBUQ9NX95 663 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms