RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 LPPQ93052 612 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 TMEM176AQ96HP8 235 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 PCDH12Q9NPG4 1184 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 ARHGAP20Q9P2F6 1191 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 OGDHLQ9ULD0 1010 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 POLR1AO95602 1720 aaPredicted RBP14.17□□□□□ -0.14
SPG11-210ENST00000558319 FAM237BA0A1B0GVD1 139 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 TMCC2O75069 709 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 PRLRP16471 622 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 CYP11B2P19099 503 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 SPIRE1Q08AE8 756 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 FCHO2Q0JRZ9 810 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 TAF13Q15543 124 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 TSGA10IPQ3SY00 556 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 NT5DC4Q86YG4 428 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 TRAPPC5Q8IUR0 188 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 SLC22A9Q8IVM8 553 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 USP7Q93009 1102 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 MCUBQ9NWR8 336 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 TRNAU1APQ9NX07 287 aaKnown RBP14.17□□□□□ -0.14
SPG11-210ENST00000558319 ZNHIT2Q9UHR6 403 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 VPS9D1Q9Y2B5 631 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 LIN7AO14910 233 aaPredicted RBP14.17□□□□□ -0.14
SPG11-210ENST00000558319 SHBGP04278 402 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 UBAP2LQ14157 1087 aaKnown RBP14.17□□□□□ -0.14
SPG11-210ENST00000558319 TTC27Q6P3X3 843 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 ADGRA1Q86SQ6 560 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 AKAP14Q86UN6 197 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 RSL24D1Q9UHA3 163 aaKnown RBP14.17□□□□□ -0.14
SPG11-210ENST00000558319 HES2Q9Y543 173 aa14.17□□□□□ -0.14
SPG11-210ENST00000558319 KCNK1O00180 336 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 ENTPD3O75355 529 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 TCEA3O75764 348 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 IFNA16P05015 189 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 PABPC1P11940 636 aaKnown RBP14.16□□□□□ -0.14
SPG11-210ENST00000558319 INSRRP14616 1297 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 ADRA1DP25100 572 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 PTENP60484 403 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 PMF1Q6P1K2 205 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 POMZP3Q6PJE2 187 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 SCIMPQ6UWF3 145 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 HHIPL2Q6UWX4 724 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 ZNF34Q8IZ26 560 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 TBATAQ96M53 351 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 SLC4A5Q9BY07 1137 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 SEMA6BQ9H3T3 888 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 ZNF112Q9UJU3 913 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 SLC27A5Q9Y2P5 690 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 SCGNO76038 276 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 FDX1P10109 184 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 ANPEPP15144 967 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 ITGALP20701 1170 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 ROR2Q01974 943 aaKnown RBP14.16□□□□□ -0.14
SPG11-210ENST00000558319 EIF2B5Q13144 721 aaKnown RBP14.16□□□□□ -0.14
SPG11-210ENST00000558319 FAM210AQ96ND0 272 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 WDR41Q9HAD4 459 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 ATP13A1Q9HD20 1204 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 TTC37Q6PGP7 1564 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 IL18R1Q13478 541 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 BRSK2Q8IWQ3 736 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 ENGASEQ8NFI3 743 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 CGRRF1Q99675 332 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 MMADHCQ9H3L0 296 aaPredicted RBP14.16□□□□□ -0.14
SPG11-210ENST00000558319 UBA2Q9UBT2 640 aaPredicted RBP14.16□□□□□ -0.14
SPG11-210ENST00000558319 PRKAA1Q13131 559 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 MZT2AQ6P582 158 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 ZNF540Q8NDQ6 660 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 COPS5Q92905 334 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 BBS4Q96RK4 519 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 ING4Q9UNL4 249 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 AXIN1O15169 862 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 CTSEP14091 401 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 FEM1CQ96JP0 617 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 DCLK3Q9C098 648 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 TOR3AQ9H497 397 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 ADPRHL2Q9NX46 363 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 SPG21Q9NZD8 308 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 DKK3Q9UBP4 350 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 TSPAN16Q9UKR8 245 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 GMEB1Q9Y692 573 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 IQSEC2Q5JU85 1478 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 OGTO15294 1046 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 SLURP2P0DP57 97 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 CCR1P32246 355 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 RCVRNP35243 200 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 CNTN2Q02246 1040 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 FOLH1Q04609 750 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 SLC5A9Q2M3M2 681 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 PPM1LQ5SGD2 360 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 IQSEC1Q6DN90 963 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 OVOS1Q6IE37 1185 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 LRRC17Q8N6Y2 441 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 MTMR8Q96EF0 704 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 RNF208Q9H0X6 261 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 SLC35C2Q9NQQ7 365 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 GSTK1Q9Y2Q3 226 aa14.16□□□□□ -0.14
SPG11-210ENST00000558319 TRBV23OR9-2A0A075B6M9 112 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 NT5C1B-RDH14C9J2C7 533 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 TRIM3O75382 744 aaPredicted RBP14.15□□□□□ -0.14
SPG11-210ENST00000558319 BANF1O75531 89 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms