RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 DHX35Q9H5Z1 703 aaKnown RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 EFCAB1Q9HAE3 211 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 TRPC7Q9HCX4 862 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 VPS45Q9NRW7 570 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 SLC38A7Q9NVC3 462 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 FAM198AQ9UFP1 575 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 ZNHIT2Q9UHR6 403 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 SLC8A2Q9UPR5 921 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 TMED5Q9Y3A6 229 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 PCDHA11Q9Y5I1 949 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 FOCADQ5VW36 1801 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 PRSS51A0A1B0GVH4 220 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 PLOD2O00469 737 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 DHX15O43143 795 aaKnown RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 BCAS2O75934 225 aaPredicted RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 ATE1O95260 518 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 TRUB2O95900 331 aaKnown RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 HMGCRP04035 888 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 KRT19P08727 400 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 PRKAR2AP13861 404 aaKnown RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 TFE3P19532 575 aaPredicted RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 CNTFP26441 200 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 MAP4P27816 1152 aaKnown RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 GARSP41250 739 aaKnown RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 MYL6P60660 151 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 PFKPQ01813 784 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 SLC10A2Q12908 348 aaPredicted RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 RALGDSQ12967 914 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 ITGA7Q13683 1181 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 NEDD8Q15843 81 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 RGS21Q2M5E4 152 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 ZNF829Q3KNS6 432 aaPredicted RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 LSM12Q3MHD2 195 aaKnown RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 MTERF2Q49AM1 385 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 FAM47CQ5HY64 1035 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 C6orf183Q5T699 404 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 SH3PXD2AQ5TCZ1 1133 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 SEL1L3Q68CR1 1132 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 LAYNQ6UX15 382 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 TMEM26Q6ZUK4 368 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 TICAM1Q8IUC6 712 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 HERC6Q8IVU3 1022 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 HACE1Q8IYU2 909 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 PGAM4Q8N0Y7 254 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 FIBCD1Q8N539 461 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 WDTC1Q8N5D0 677 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 DEFB123Q8N688 67 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 TMEM102Q8N9M5 508 aaPredicted RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 RP9Q8TA86 221 aaKnown RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 ZBED3Q96IU2 234 aaPredicted RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 SLC2A11Q9BYW1 496 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 INO80BQ9C086 356 aaPredicted RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 MTMR12Q9C0I1 747 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 ILKAPQ9H0C8 392 aaPredicted RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 SDCBP2Q9H190 292 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 HIPK3Q9H422 1215 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 CXorf21Q9HAI6 301 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 NGRNQ9NPE2 291 aaKnown RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 ASNSD1Q9NWL6 643 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 ITGB1BP2Q9UKP3 347 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 ADAMTSL1Q8N6G6 1762 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 TCRBV5S1A1TA0A578 114 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 KPNA7A9QM74 516 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 CFAP99D6REC4 459 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 NFIBO00712 420 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 CXCL11O14625 94 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 ZNF195O14628 629 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 WDR46O15213 610 aaKnown RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 TPST1O60507 370 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 TIPRLO75663 272 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 METTL18O95568 372 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 ESRRBO95718 433 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 GSRP00390 522 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 CST3P01034 146 aaPredicted RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 CHRNGP07510 517 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 ZNF26P17031 533 aaPredicted RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 TCF7P36402 384 aaPredicted RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 RAP1GAPP47736 663 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 YWHAEP62258 255 aaKnown RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 FKBP1AP62942 108 aaKnown RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 MRPS9P82933 396 aaKnown RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 TFAMQ00059 246 aaKnown RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 GNA12Q03113 381 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 DPYSQ14117 519 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 SPIDRQ14159 915 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 C15orf59Q2T9L4 293 aaPredicted RBP5.16□□□□□ -1.58
HMG20A-204ENST00000558288 ZBED5Q49AG3 693 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 FGD3Q5JSP0 725 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 LRRC8EQ6NSJ5 796 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 SH3BP5LQ7L8J4 393 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 SIX6OS1Q8N1H7 587 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 TRPC4APQ8TEL6 797 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 CYGBQ8WWM9 190 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 TMEM143Q96AN5 459 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 LRRC39Q96DD0 335 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 CGRRF1Q99675 332 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 SLC29A1Q99808 456 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 EFHD1Q9BUP0 239 aa5.16□□□□□ -1.58
HMG20A-204ENST00000558288 TARS2Q9BW92 718 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms