RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 EFSO43281 561 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 MSI1O43347 362 aaKnown RBP5.34□□□□□ -1.55
SPG11-208ENST00000558155 PPP6R2O75170 966 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 PPFIA2O75334 1257 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 LUC7L3O95232 432 aaKnown RBP5.34□□□□□ -1.55
SPG11-208ENST00000558155 IGLV3-27P01718 113 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 NR3C1P04150 777 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 GIMD1P0DJR0 217 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 MYF5P13349 255 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 LCP1P13796 627 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 ITGB6P18564 788 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 TGM2P21980 687 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 GTF2H1P32780 548 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 DRD3P35462 400 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 CTSOP43234 321 aaPredicted RBP5.34□□□□□ -1.55
SPG11-208ENST00000558155 GCLMP48507 274 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 RAD23BP54727 409 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 RPS24P62847 133 aaKnown RBP5.34□□□□□ -1.55
SPG11-208ENST00000558155 ENPEPQ07075 957 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 ADIGQ0VDE8 80 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 BST2Q10589 180 aaKnown RBP5.34□□□□□ -1.55
SPG11-208ENST00000558155 CNTN1Q12860 1018 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 ZNF177Q13360 481 aaPredicted RBP5.34□□□□□ -1.55
SPG11-208ENST00000558155 CDKN3Q16667 212 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 C4orf17Q53FE4 359 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 DCAF6Q58WW2 860 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 FAM133BQ5BKY9 247 aaKnown RBP5.34□□□□□ -1.55
SPG11-208ENST00000558155 FSCBQ5H9T9 825 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 MS4A13Q5J8X5 152 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 ZCCHC8Q6NZY4 707 aaKnown RBP5.34□□□□□ -1.55
SPG11-208ENST00000558155 MSANTD2Q6P1R3 559 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 FAM173BQ6P4H8 233 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 MMS22LQ6ZRQ5 1243 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 INTS8Q75QN2 995 aaKnown RBP5.34□□□□□ -1.55
SPG11-208ENST00000558155 EFL1Q7Z2Z2 1120 aaKnown RBP5.34□□□□□ -1.55
SPG11-208ENST00000558155 C14orf80Q86SX3 495 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 APCDD1Q8J025 514 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 CFAP52Q8N1V2 620 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 SCML4Q8N228 414 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 FBXO39Q8N4B4 442 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 SLC4A11Q8NBS3 891 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 TMEM145Q8NBT3 493 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 TAS1R2Q8TE23 839 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 IRGQQ8WZA9 623 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 EXTL1Q92935 676 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 FAM131CQ96AQ9 280 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 PRR11Q96HE9 360 aaPredicted RBP5.34□□□□□ -1.55
SPG11-208ENST00000558155 USP28Q96RU2 1077 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 CALN1Q9BXU9 219 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 BLZF1Q9H2G9 400 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 ZSCAN16Q9H4T2 348 aaPredicted RBP5.34□□□□□ -1.55
SPG11-208ENST00000558155 CISHQ9NSE2 258 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 DNAJC28Q9NX36 388 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 SEPT10Q9P0V9 454 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 SLC12A6Q9UHW9 1150 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 IPO11Q9UI26 975 aaKnown RBP5.34□□□□□ -1.55
SPG11-208ENST00000558155 KIAA1257Q9ULG3 409 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 PPM1HQ9ULR3 514 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 CA5BQ9Y2D0 317 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 RP1P56715 2156 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 TRPM6Q9BX84 2022 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 LY6G6EA0A0G2JKS1 128 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 A0A1W2PNU3 283 aaPredicted RBP5.33□□□□□ -1.56
SPG11-208ENST00000558155 A0A1W2PQU0 124 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 EME2A4GXA9 379 aaPredicted RBP5.33□□□□□ -1.56
SPG11-208ENST00000558155 A6NNZ2 444 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 TULP2O00295 520 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 TPP1O14773 563 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 MCF2LO15068 1137 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 ALOX15BO15296 676 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 POLR2DO15514 142 aaKnown RBP5.33□□□□□ -1.56
SPG11-208ENST00000558155 STX10O60499 249 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 CUTAO60888 179 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 NEBLO76041 1014 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 FBXO21O94952 628 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 PCDH8O95206 1070 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 CSF2P04141 144 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 ITGA2BP08514 1039 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 SETSIPP0DME0 302 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 VDRP11473 427 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 CD19P15391 556 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 HNRNPA2B1P22626 353 aaKnown RBP5.33□□□□□ -1.56
SPG11-208ENST00000558155 RPL13P26373 211 aaKnown RBP5.33□□□□□ -1.56
SPG11-208ENST00000558155 PSMC2P35998 433 aaKnown RBP5.33□□□□□ -1.56
SPG11-208ENST00000558155 AFMP43652 599 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 NASPP49321 788 aaPredicted RBP5.33□□□□□ -1.56
SPG11-208ENST00000558155 STK19P49842 368 aaPredicted RBP5.33□□□□□ -1.56
SPG11-208ENST00000558155 PLK1P53350 603 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 DAOAP59103 153 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 YWHAEP62258 255 aaKnown RBP5.33□□□□□ -1.56
SPG11-208ENST00000558155 NFKB2Q00653 900 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 PPP3CAQ08209 521 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 STK4Q13043 487 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 EIF3IQ13347 325 aaKnown RBP5.33□□□□□ -1.56
SPG11-208ENST00000558155 CUL4BQ13620 913 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 SPIDRQ14159 915 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 NR0B2Q15466 257 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 GOLGA7BQ2TAP0 167 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 ZNF542PQ5EBM4 170 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 C1orf220Q5T0J3 134 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms