RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 DPY19L2P1Q6NXN4 242 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 CCNI2Q6ZMN8 369 aaPredicted RBP15.02■□□□□ -0
SHMT2-235ENST00000557740 SH2D3CQ8N5H7 860 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 PIP4K2CQ8TBX8 421 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 PGAP3Q96FM1 320 aaPredicted RBP15.02■□□□□ -0
SHMT2-235ENST00000557740 CCDC114Q96M63 670 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 KDM4CQ9H3R0 1056 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 SAMSN1Q9NSI8 373 aaKnown RBP15.02■□□□□ -0
SHMT2-235ENST00000557740 TOR4AQ9NXH8 423 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 TAB2Q9NYJ8 693 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 OR51B4Q9Y5P0 310 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 MCF2LO15068 1137 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 LATO43561 262 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 PLRG1O43660 514 aaKnown RBP15.01□□□□□ -0.01
SHMT2-235ENST00000557740 TPM2P07951 284 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 NUDT1P36639 197 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 ARRB1P49407 418 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-235ENST00000557740 SCAPQ12770 1279 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 KCNMA1Q12791 1236 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 CNTN1Q12860 1018 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 ALFQ53S48 1182 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 CT47A1Q5JQC4 288 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-235ENST00000557740 C6orf118Q5T5N4 469 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 NAA35Q5VZE5 725 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 TFAP2DQ7Z6R9 452 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 SETD3Q86TU7 594 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-235ENST00000557740 NOP9Q86U38 636 aaKnown RBP15.01□□□□□ -0.01
SHMT2-235ENST00000557740 PRPF39Q86UA1 669 aaKnown RBP15.01□□□□□ -0.01
SHMT2-235ENST00000557740 GATAD2AQ86YP4 633 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 DCAF4L2Q8NA75 395 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 ATP11CQ8NB49 1132 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 NT5C3BQ969T7 300 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 NAA15Q9BXJ9 866 aaKnown RBP15.01□□□□□ -0.01
SHMT2-235ENST00000557740 STK33Q9BYT3 514 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 ANLNQ9NQW6 1124 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 VPS51Q9UID3 782 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 SARDHQ9UL12 918 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 PPM1HQ9ULR3 514 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 HS3ST2Q9Y278 367 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 SNX10Q9Y5X0 201 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 ZFYVE26Q68DK2 2539 aa15.01□□□□□ -0.01
SHMT2-235ENST00000557740 A0A1W2PR77 199 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 C10orf142B7Z368 130 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 SNAP91O60641 907 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 ITGAVP06756 1048 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 MMEP08473 750 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 SRCP12931 536 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 MAT2AP31153 395 aaKnown RBP15□□□□□ -0.01
SHMT2-235ENST00000557740 FLT3P36888 993 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 NXPH1P58417 271 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 C2CD6Q53TS8 623 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 PRAMEF14Q5SWL7 426 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 AGBL4Q5VU57 503 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 TMPRSS7Q7RTY8 843 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 TRIM69Q86WT6 500 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 PROSER1Q86XN7 944 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 GALNT15Q8N3T1 639 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 EPS8L1Q8TE68 723 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 CPA5Q8WXQ8 436 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 FAM131CQ96AQ9 280 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 CFAP57Q96MR6 1250 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 PSMB7Q99436 277 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 CCDC86Q9H6F5 360 aaKnown RBP15□□□□□ -0.01
SHMT2-235ENST00000557740 DYRK4Q9NR20 520 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 MPP6Q9NZW5 540 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 RALYQ9UKM9 306 aaKnown RBP15□□□□□ -0.01
SHMT2-235ENST00000557740 DMTF1Q9Y222 760 aa15□□□□□ -0.01
SHMT2-235ENST00000557740 ZFHX4Q86UP3 3567 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 ANKRD11Q6UB99 2663 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-235ENST00000557740 DRGXA6NNA5 263 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 E9PAM4 449 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 I6L893 689 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-235ENST00000557740 TLR4O00206 839 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 WNT9AO14904 365 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 DKK1O94907 266 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 RRM1P23921 792 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 EPHA8P29322 1005 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-235ENST00000557740 OR1E1P30953 314 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 CLCN6P51797 869 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 NOMO3P69849 1222 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 CCDC15Q0P6D6 951 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 SETMARQ53H47 684 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-235ENST00000557740 FKBP15Q5T1M5 1219 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 FAM131BQ86XD5 332 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 ZNF677Q86XU0 584 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 ZNF683Q8IZ20 524 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 OXR1Q8N573 874 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 C1orf74Q96LT6 269 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 PREBQ9HCU5 417 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 METTL5Q9NRN9 209 aaKnown RBP14.99□□□□□ -0.01
SHMT2-235ENST00000557740 TMPRSS4Q9NRS4 437 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 NYNRINQ9P2P1 1898 aaKnown RBP14.99□□□□□ -0.01
SHMT2-235ENST00000557740 ZZEF1O43149 2961 aa14.99□□□□□ -0.01
SHMT2-235ENST00000557740 IGLV3-10A0A075B6K4 115 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 A0A0D9SEW6 157 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 K7ERQ8 282 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 CBX4O00257 560 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 KPNA3O00505 521 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-235ENST00000557740 MAGEC1O60732 1142 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 SRGAP2O75044 1071 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms