RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 BST2Q10589 180 aaKnown RBP12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 MPP3Q13368 585 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 MYBPC3Q14896 1274 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 OLFML2BQ68BL8 750 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 NXNQ6DKJ4 435 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 ZYG11AQ6WRX3 759 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 LBX2Q6XYB7 198 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 TMEM135Q86UB9 458 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 FAM131BQ86XD5 332 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 PSTKQ8IV42 348 aaKnown RBP12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 C7orf31Q8N865 590 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 NETO2Q8NC67 525 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 RNF139Q8WU17 664 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 MPHOSPH6Q99547 160 aaKnown RBP12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 HAUS8Q9BT25 410 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 PRDM12Q9H4Q4 367 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 TASP1Q9H6P5 420 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 KLHL8Q9P2G9 620 aaPredicted RBP12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 ANKRD6Q9Y2G4 727 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 ZCWPW2A0A1B0GU75 182 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 GRID2O43424 1007 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 TRPA1O75762 1119 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 PSMC3P17980 439 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 TFEBP19484 476 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 RPS12P25398 132 aaKnown RBP12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 HADHAP40939 763 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 ABCG1P45844 678 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 ARL13AQ5H913 290 aaPredicted RBP12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 RNF148Q8N7C7 305 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 CNTD1Q8N815 330 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 DNAAF3Q8N9W5 541 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 OR6B3Q8NGW1 331 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 NLRP7Q8WX94 980 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 PPP1R16BQ96T49 567 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 SLC2A11Q9BYW1 496 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 IL22Q9GZX6 179 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 LMCD1Q9NZU5 365 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 EPS15L1Q9UBC2 864 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 TLK1Q9UKI8 766 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 ZSWIM8A7E2V4 1837 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 A0A0G2JMZ2 1700 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 LRRC37A2A6NM11 1700 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 MYOCOSA0A1B0GUC4 107 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 PFDN1O60925 122 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 ZNF189O75820 626 aaPredicted RBP12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 CABYRO75952 493 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 C22orf31O95567 290 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 AP2A1O95782 977 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 ACADSBP45954 432 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 SULT1E1P49888 294 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 BCAT1P54687 386 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 IGBP1P78318 339 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 OLIG2Q13516 323 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 PPP2R5DQ14738 602 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 UNC93AQ86WB7 457 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 IFNLR1Q8IU57 520 aaPredicted RBP12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 MICALL2Q8IY33 904 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 TMEM102Q8N9M5 508 aaPredicted RBP12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 ANKRD52Q8NB46 1076 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 VPS39Q96JC1 886 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 MAML3Q96JK9 1138 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 PGLYRP2Q96PD5 576 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 ZBTB26Q9HCK0 441 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 ZNF638Q14966 1978 aaKnown RBP12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 H0YJX3 145 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 TRIM38O00635 465 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 ACOT8O14734 319 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 USP12O75317 370 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 F7P08709 466 aaPredicted RBP12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 CCDC166P0CW27 439 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 DPEP1P16444 411 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 ADORA2BP29275 332 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 DPP6P42658 865 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 MATKP42679 507 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 ATXN3P54252 364 aaPredicted RBP12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 ANO4Q32M45 955 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 PRAMEF18Q5VWM3 479 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 KCNMB4Q86W47 210 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 ADAM32Q8TC27 787 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 EME1Q96AY2 570 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 KLHL32Q96NJ5 620 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 C20orf96Q9NUD7 363 aaPredicted RBP12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 NME7Q9Y5B8 376 aa12.03□□□□□ -0.48
VIPAS39-211ENST00000557658 MAGEB16A2A368 324 aa12.02□□□□□ -0.48
VIPAS39-211ENST00000557658 TK2O00142 265 aa12.02□□□□□ -0.48
VIPAS39-211ENST00000557658 TRMUO75648 421 aaKnown RBP12.02□□□□□ -0.48
VIPAS39-211ENST00000557658 VAPBO95292 243 aa12.02□□□□□ -0.48
VIPAS39-211ENST00000557658 CDK4P11802 303 aa12.02□□□□□ -0.48
VIPAS39-211ENST00000557658 DCTN2Q13561 401 aaKnown RBP12.02□□□□□ -0.48
VIPAS39-211ENST00000557658 DPYSQ14117 519 aa12.02□□□□□ -0.48
VIPAS39-211ENST00000557658 PTK2BQ14289 1009 aa12.02□□□□□ -0.48
VIPAS39-211ENST00000557658 PAFAH1B3Q15102 231 aaKnown RBP12.02□□□□□ -0.48
VIPAS39-211ENST00000557658 SLC25A52Q3SY17 297 aa12.02□□□□□ -0.48
VIPAS39-211ENST00000557658 TMEM198Q66K66 360 aa12.02□□□□□ -0.48
VIPAS39-211ENST00000557658 AMIGO2Q86SJ2 522 aa12.02□□□□□ -0.48
VIPAS39-211ENST00000557658 TMA16Q96EY4 203 aaKnown RBP12.02□□□□□ -0.48
VIPAS39-211ENST00000557658 SCYL1Q96KG9 808 aa12.02□□□□□ -0.48
VIPAS39-211ENST00000557658 LPIN3Q9BQK8 851 aa12.02□□□□□ -0.48
VIPAS39-211ENST00000557658 CASS4Q9NQ75 786 aa12.02□□□□□ -0.48
VIPAS39-211ENST00000557658 CHCHD3Q9NX63 227 aaKnown RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms