RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 PROX2Q3B8N5 592 aa14.48□□□□□ -0.09
SLIRP-210ENST00000557431 ZNF542PQ5EBM4 170 aa14.48□□□□□ -0.09
SLIRP-210ENST00000557431 FAM183BPQ6ZVS7 135 aa14.48□□□□□ -0.09
SLIRP-210ENST00000557431 TRIM59Q8IWR1 403 aa14.48□□□□□ -0.09
SLIRP-210ENST00000557431 SLC25A45Q8N413 288 aa14.48□□□□□ -0.09
SLIRP-210ENST00000557431 WDTC1Q8N5D0 677 aa14.48□□□□□ -0.09
SLIRP-210ENST00000557431 FAM131CQ96AQ9 280 aa14.48□□□□□ -0.09
SLIRP-210ENST00000557431 ARRDC3Q96B67 414 aa14.48□□□□□ -0.09
SLIRP-210ENST00000557431 DHTKD1Q96HY7 919 aaPredicted RBP14.48□□□□□ -0.09
SLIRP-210ENST00000557431 CPXM1Q96SM3 734 aa14.48□□□□□ -0.09
SLIRP-210ENST00000557431 THAP9Q9H5L6 903 aa14.48□□□□□ -0.09
SLIRP-210ENST00000557431 ANLNQ9NQW6 1124 aa14.48□□□□□ -0.09
SLIRP-210ENST00000557431 TMPRSS4Q9NRS4 437 aa14.48□□□□□ -0.09
SLIRP-210ENST00000557431 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.48□□□□□ -0.09
SLIRP-210ENST00000557431 AJAP1Q9UKB5 411 aaPredicted RBP14.48□□□□□ -0.09
SLIRP-210ENST00000557431 CLCA2Q9UQC9 943 aa14.48□□□□□ -0.09
SLIRP-210ENST00000557431 HS3ST4Q9Y661 456 aa14.48□□□□□ -0.09
SLIRP-210ENST00000557431 GOLGA6L4A6NEF3 574 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 P4HA2O15460 535 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 AFPP02771 609 aaKnown RBP14.47□□□□□ -0.09
SLIRP-210ENST00000557431 C1SP09871 688 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 THEGLP0DJG4 465 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 TFE3P19532 575 aaPredicted RBP14.47□□□□□ -0.09
SLIRP-210ENST00000557431 DAB2P98082 770 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 CETN1Q12798 172 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 AUHQ13825 339 aaKnown RBP14.47□□□□□ -0.09
SLIRP-210ENST00000557431 RABGAP1LQ5R372 815 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 PIP5KL1Q5T9C9 394 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 OTUD1Q5VV17 481 aaPredicted RBP14.47□□□□□ -0.09
SLIRP-210ENST00000557431 TMEM110Q86TL2 294 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 OXR1Q8N573 874 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 SH2D3CQ8N5H7 860 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 CHST14Q8NCH0 376 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 OR13H1Q8NG92 308 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 PSMB7Q99436 277 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 FEM1AQ9BSK4 669 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 CALN1Q9BXU9 219 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 NRSN2Q9GZP1 204 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 SIK2Q9H0K1 926 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 ERVMER34-1Q9H9K5 563 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 VPS28Q9UK41 221 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 PPM1HQ9ULR3 514 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 CNTN6Q9UQ52 1028 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 OR51B4Q9Y5P0 310 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 LRP4O75096 1905 aa14.47□□□□□ -0.09
SLIRP-210ENST00000557431 A0A1W2PQU0 124 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 C1QTNF3-AMACRE9PGA6 284 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 KPNA3O00505 521 aaPredicted RBP14.46□□□□□ -0.09
SLIRP-210ENST00000557431 SMAD6O43541 496 aaKnown RBP14.46□□□□□ -0.09
SLIRP-210ENST00000557431 ATP9BO43861 1147 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 PAGE1O75459 146 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 MT-CO3P00414 261 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 ERBB2P04626 1255 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 PNMA6AP0CW24 399 aaPredicted RBP14.46□□□□□ -0.09
SLIRP-210ENST00000557431 SRCP12931 536 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 SLC9A1P19634 815 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 RRM1P23921 792 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 ACP1P24666 158 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 PLK1P53350 603 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 CDK17Q00537 523 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 SULT2A1Q06520 285 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 SLC12A1Q13621 1099 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 SETMARQ53H47 684 aaPredicted RBP14.46□□□□□ -0.09
SLIRP-210ENST00000557431 ALFQ53S48 1182 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 OR6B2Q6IFH4 312 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 LINGO4Q6UY18 593 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 BEND5Q7L4P6 421 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 TRIM69Q86WT6 500 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 CREBRFQ8IUR6 639 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 C1orf131Q8NDD1 294 aaKnown RBP14.46□□□□□ -0.09
SLIRP-210ENST00000557431 SNIP1Q8TAD8 396 aaKnown RBP14.46□□□□□ -0.09
SLIRP-210ENST00000557431 GRIN3AQ8TCU5 1115 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 KLHDC7BQ96G42 594 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 SLC2A13Q96QE2 648 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 SRRTQ9BXP5 876 aaKnown RBP14.46□□□□□ -0.09
SLIRP-210ENST00000557431 TNKS2Q9H2K2 1166 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 PLCB1Q9NQ66 1216 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 SLC12A6Q9UHW9 1150 aa14.46□□□□□ -0.09
SLIRP-210ENST00000557431 ZFR2Q9UPR6 939 aaKnown RBP14.46□□□□□ -0.09
SLIRP-210ENST00000557431 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.46□□□□□ -0.09
SLIRP-210ENST00000557431 COL6A6A6NMZ7 2263 aa14.45□□□□□ -0.1
SLIRP-210ENST00000557431 PRAMEF26H0Y7S4 382 aa14.45□□□□□ -0.1
SLIRP-210ENST00000557431 I6L893 689 aaPredicted RBP14.45□□□□□ -0.1
SLIRP-210ENST00000557431 MCF2LO15068 1137 aa14.45□□□□□ -0.1
SLIRP-210ENST00000557431 ATXN7O15265 892 aaPredicted RBP14.45□□□□□ -0.1
SLIRP-210ENST00000557431 RRP8O43159 456 aaKnown RBP14.45□□□□□ -0.1
SLIRP-210ENST00000557431 SLC7A4O43246 635 aa14.45□□□□□ -0.1
SLIRP-210ENST00000557431 NEBLO76041 1014 aa14.45□□□□□ -0.1
SLIRP-210ENST00000557431 ENDOD1O94919 500 aa14.45□□□□□ -0.1
SLIRP-210ENST00000557431 MPOP05164 745 aa14.45□□□□□ -0.1
SLIRP-210ENST00000557431 GIMD1P0DJR0 217 aa14.45□□□□□ -0.1
SLIRP-210ENST00000557431 DGKAP23743 735 aa14.45□□□□□ -0.1
SLIRP-210ENST00000557431 CCR1P32246 355 aa14.45□□□□□ -0.1
SLIRP-210ENST00000557431 CXADRP78310 365 aa14.45□□□□□ -0.1
SLIRP-210ENST00000557431 C19orf57Q0VDD7 668 aa14.45□□□□□ -0.1
SLIRP-210ENST00000557431 FAM46CQ5VWP2 391 aa14.45□□□□□ -0.1
SLIRP-210ENST00000557431 SEL1L3Q68CR1 1132 aa14.45□□□□□ -0.1
SLIRP-210ENST00000557431 PCSK4Q6UW60 755 aa14.45□□□□□ -0.1
SLIRP-210ENST00000557431 DSG4Q86SJ6 1040 aa14.45□□□□□ -0.1
SLIRP-210ENST00000557431 ERICH1Q86X53 443 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms