RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 HS3ST2Q9Y278 367 aa14.55□□□□□ -0.08
SNX6-210ENST00000557341 TBC1D3DA0A087WVF3 549 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 TBC1D3IA0A087WXS9 549 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 TBC1D3EA0A087X179 549 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 TBC1D3KA0A087X1G2 549 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 A0A1B0GTQ1 180 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 FAM170AA1A519 330 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 TBC1D3FA6NER0 549 aaPredicted RBP14.54□□□□□ -0.08
SNX6-210ENST00000557341 TBC1D3LB9A6J9 549 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 I6L893 689 aaPredicted RBP14.54□□□□□ -0.08
SNX6-210ENST00000557341 KCNK3O14649 394 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 LATO43561 262 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 PLRG1O43660 514 aaKnown RBP14.54□□□□□ -0.08
SNX6-210ENST00000557341 CNTN5O94779 1100 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 TPM2P07951 284 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 TBC1D3HP0C7X1 549 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 ZNF18P17022 549 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 FLT3P36888 993 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 METAP1P53582 386 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 PPP2CBP62714 309 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 PPP2CAP67775 309 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 IL9RQ01113 521 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 DLG2Q15700 870 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 ALFQ53S48 1182 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 SLC45A4Q5BKX6 768 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 TBC1D3GQ6DHY5 549 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 TBC1D3CQ6IPX1 549 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.54□□□□□ -0.08
SNX6-210ENST00000557341 SETD3Q86TU7 594 aaPredicted RBP14.54□□□□□ -0.08
SNX6-210ENST00000557341 SLCO6A1Q86UG4 719 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 ZNF677Q86XU0 584 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 ZNF683Q8IZ20 524 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 TBC1D3Q8IZP1 549 aaPredicted RBP14.54□□□□□ -0.08
SNX6-210ENST00000557341 DCAF4L2Q8NA75 395 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 SERAC1Q96JX3 654 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 CCDC114Q96M63 670 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 ELF4Q99607 663 aaPredicted RBP14.54□□□□□ -0.08
SNX6-210ENST00000557341 STK33Q9BYT3 514 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 TOR4AQ9NXH8 423 aa14.54□□□□□ -0.08
SNX6-210ENST00000557341 GOLGA4Q13439 2230 aaKnown RBP14.53□□□□□ -0.08
SNX6-210ENST00000557341 ADAMTS20P59510 1910 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 GOLGA8SH3BPF8 625 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 MCF2LO15068 1137 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 YKT6O15498 198 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 TNFSF14O43557 240 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 BNIP3LO60238 219 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 WNT1P04628 370 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 MMEP08473 750 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 ATXN1LP0C7T5 689 aaKnown RBP14.53□□□□□ -0.08
SNX6-210ENST00000557341 NUDT1P36639 197 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 ANP32AP39687 249 aaKnown RBP14.53□□□□□ -0.08
SNX6-210ENST00000557341 C2CD6Q53TS8 623 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 C6orf118Q5T5N4 469 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 AGBL4Q5VU57 503 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 NAA35Q5VZE5 725 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 NAPEPLDQ6IQ20 393 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 CLEC17AQ6ZS10 378 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 ARCQ7LC44 396 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 TFAP2DQ7Z6R9 452 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 PRPF39Q86UA1 669 aaKnown RBP14.53□□□□□ -0.08
SNX6-210ENST00000557341 ATP11CQ8NB49 1132 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 PIP4K2CQ8TBX8 421 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 ENOX1Q8TC92 643 aaKnown RBP14.53□□□□□ -0.08
SNX6-210ENST00000557341 C1orf74Q96LT6 269 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 CFAP57Q96MR6 1250 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 PSMB7Q99436 277 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 GANQ9H2C0 597 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 GDF3Q9NR23 364 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 FTSJ1Q9UET6 329 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 VPS51Q9UID3 782 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 SARDHQ9UL12 918 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 FARP1Q9Y4F1 1045 aaPredicted RBP14.53□□□□□ -0.08
SNX6-210ENST00000557341 SNX10Q9Y5X0 201 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 ANKRD36A6QL64 1941 aa14.53□□□□□ -0.08
SNX6-210ENST00000557341 LAMA5O15230 3695 aa14.52□□□□□ -0.08
SNX6-210ENST00000557341 IGLV3-10A0A075B6K4 115 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 A0A1W2PR77 199 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 GOLGA8CPA6NN73 597 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 SRRM3A6NNA2 597 aaPredicted RBP14.52□□□□□ -0.09
SNX6-210ENST00000557341 E9PAM4 449 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 PLK4O00444 970 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 SNAP91O60641 907 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 RTN2O75298 545 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 DKK1O94907 266 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 SRCP12931 536 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 OR1E1P30953 314 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 CLCN6P51797 869 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 CNTN1Q12860 1018 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 POM121L1PQ3SYA9 428 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 FKBP15Q5T1M5 1219 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 CDKAL1Q5VV42 579 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 TRNP1Q6NT89 227 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 BNIPLQ7Z465 357 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 TRIM69Q86WT6 500 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 OXR1Q8N573 874 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 CPA5Q8WXQ8 436 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 HAPLN3Q96S86 360 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 VPS16Q9H269 839 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 METTL5Q9NRN9 209 aaKnown RBP14.52□□□□□ -0.09
SNX6-210ENST00000557341 TMPRSS4Q9NRS4 437 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms