RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 ZNF385BQ569K4 471 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 WDR45BQ5MNZ6 344 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 SYCP2LQ5T4T6 812 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 EMC10Q5UCC4 262 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 C9orf57Q5W0N0 161 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 TRMT11Q7Z4G4 463 aaKnown RBP5.16□□□□□ -1.58
ATXN3-247ENST00000557311 ZNF227Q86WZ6 799 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 DAW1Q8N136 415 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 TXLNBQ8N3L3 684 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 GALNT15Q8N3T1 639 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 DEFB119Q8N690 84 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 CELF2-AS1Q8N7Q2 184 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 ARL14EPQ8N8R7 260 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-247ENST00000557311 TRIML1Q8N9V2 468 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 OR2I1PQ8NGU4 316 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 SPATA18Q8TC71 538 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 SETD7Q8WTS6 366 aaKnown RBP5.16□□□□□ -1.58
ATXN3-247ENST00000557311 TRMT2BQ96GJ1 504 aaKnown RBP5.16□□□□□ -1.58
ATXN3-247ENST00000557311 ZNF419Q96HQ0 510 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-247ENST00000557311 AGAP3Q96P47 875 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 GBP4Q96PP9 640 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 SLC22A12Q96S37 553 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 CDC6Q99741 560 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 CRACR2AQ9BSW2 395 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 PI4K2AQ9BTU6 479 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 TIPINQ9BVW5 301 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 TM6SF1Q9BZW5 370 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 RSPH9Q9H1X1 276 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-247ENST00000557311 RPF1Q9H9Y2 349 aaKnown RBP5.16□□□□□ -1.58
ATXN3-247ENST00000557311 TRPC7Q9HCX4 862 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 TNFRSF12AQ9NP84 129 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 PDRG1Q9NUG6 133 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 MARCH2Q9P0N8 246 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 GCNT4Q9P109 453 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 KLHL14Q9P2G3 628 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 ORC3Q9UBD5 711 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-247ENST00000557311 FBXO9Q9UK97 447 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-247ENST00000557311 NUDT5Q9UKK9 219 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 ARHGAP26Q9UNA1 814 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 DERAQ9Y315 318 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 ATXN2Q99700 1313 aaKnown RBP5.16□□□□□ -1.58
ATXN3-247ENST00000557311 ASXL3Q9C0F0 2248 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 TDRD15B5MCY1 1934 aaKnown RBP5.15□□□□□ -1.58
ATXN3-247ENST00000557311 ANO9A1A5B4 782 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 TBC1D3BA6NDS4 549 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 ANTXRLA6NF34 631 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-247ENST00000557311 H0YCG3 227 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 J3QKU1 62 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 PPEF2O14830 753 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 TIMM44O43615 452 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 NDUFS2O75306 463 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 TADA3O75528 432 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 C1QL1O75973 258 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 CTDNEP1O95476 244 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 OR52Z1P0C646 297 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 ZNF883P0CG24 379 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 FDPSP14324 419 aaKnown RBP5.15□□□□□ -1.59
ATXN3-247ENST00000557311 BDNFP23560 247 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 USP8P40818 1118 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 TRPC1P48995 793 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 GPR15P49685 360 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 TAF6P49848 677 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 CORO7P57737 925 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 LINC00310P59036 64 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 TMED1Q13445 227 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 KCNB1Q14721 858 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 E2F5Q15329 346 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 DHCR24Q15392 516 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 ZNF174Q15697 407 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 PLEKHN1Q494U1 663 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-247ENST00000557311 PREPLQ4J6C6 727 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-247ENST00000557311 ZC2HC1CQ53FD0 456 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-247ENST00000557311 SDHAF4Q5VUM1 108 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 WSCD1Q658N2 575 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 MRM1Q6IN84 353 aaKnown RBP5.15□□□□□ -1.59
ATXN3-247ENST00000557311 SDE2Q6IQ49 451 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 CCDC70Q6NSX1 233 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 RINT1Q6NUQ1 792 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 RHBDF2Q6PJF5 856 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 IL27RAQ6UWB1 636 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 DBX2Q6ZNG2 339 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 C1orf186Q6ZWK4 172 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 ANKRD13BQ86YJ7 626 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 SLC41A1Q8IVJ1 513 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 RBM12BQ8IXT5 1001 aaKnown RBP5.15□□□□□ -1.59
ATXN3-247ENST00000557311 DIS3L2Q8IYB7 885 aaKnown RBP5.15□□□□□ -1.59
ATXN3-247ENST00000557311 KRT222Q8N1A0 295 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 ZNF843Q8N446 348 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 PDILTQ8N807 584 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 TMEM161BQ8NDZ6 487 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 DIO2Q92813 273 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 CCDC47Q96A33 483 aaKnown RBP5.15□□□□□ -1.59
ATXN3-247ENST00000557311 SIGLEC10Q96LC7 697 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 ACBD6Q9BR61 282 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 PYM1Q9BRP8 204 aaKnown RBP5.15□□□□□ -1.59
ATXN3-247ENST00000557311 MMTAG2Q9BU76 263 aaKnown RBP5.15□□□□□ -1.59
ATXN3-247ENST00000557311 CCSER1Q9C0I3 900 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 HAPLN2Q9GZV7 340 aa5.15□□□□□ -1.59
ATXN3-247ENST00000557311 PRORYQ9H606 182 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms