RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 CTBP1Q13363 440 aa19.65■□□□□ 0.74
FOXN3-214ENST00000557258 PEX6Q13608 980 aa19.65■□□□□ 0.74
FOXN3-214ENST00000557258 DSC3Q14574 896 aa19.65■□□□□ 0.74
FOXN3-214ENST00000557258 EML3Q32P44 896 aa19.65■□□□□ 0.74
FOXN3-214ENST00000557258 KHDC1Q4VXA5 237 aaKnown RBP19.65■□□□□ 0.74
FOXN3-214ENST00000557258 DCLRE1AQ6PJP8 1040 aa19.65■□□□□ 0.74
FOXN3-214ENST00000557258 TMEM135Q86UB9 458 aa19.65■□□□□ 0.74
FOXN3-214ENST00000557258 ARHGAP12Q8IWW6 846 aa19.65■□□□□ 0.74
FOXN3-214ENST00000557258 MAN1C1Q9NR34 630 aa19.65■□□□□ 0.74
FOXN3-214ENST00000557258 MKS1Q9NXB0 559 aa19.65■□□□□ 0.74
FOXN3-214ENST00000557258 KCNK4Q9NYG8 393 aa19.65■□□□□ 0.74
FOXN3-214ENST00000557258 TDRD15B5MCY1 1934 aaKnown RBP19.64■□□□□ 0.73
FOXN3-214ENST00000557258 A0A096LPK6 155 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 TMEM88BA6NKF7 163 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 B2RBV5 119 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 GSC2O15499 205 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 ZNF623O75123 536 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 CNTFP26441 200 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 AIF1P55008 147 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 MAXP61244 160 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 MBTPS1Q14703 1052 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 KPNB1Q14974 876 aaKnown RBP19.64■□□□□ 0.73
FOXN3-214ENST00000557258 NAPRTQ6XQN6 538 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 KYAT3Q6YP21 454 aaKnown RBP19.64■□□□□ 0.73
FOXN3-214ENST00000557258 RAPH1Q70E73 1250 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 MAVSQ7Z434 540 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 THEM5Q8N1Q8 247 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 ATAD1Q8NBU5 361 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 MAGEC3Q8TD91 643 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 WDR60Q8WVS4 1066 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 CPNE1Q99829 537 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 FICDQ9BVA6 458 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 THAP1Q9NVV9 213 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 M0QZQ0 153 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 MYCP01106 439 aaPredicted RBP19.64■□□□□ 0.73
FOXN3-214ENST00000557258 CLLU1OSQ5K130 101 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 ZNF354CQ86Y25 554 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 MIB1Q86YT6 1006 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 GPATCH11Q8N954 259 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 NAT9Q9BTE0 207 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.64■□□□□ 0.737e-7■□□□□ 10.3
FOXN3-214ENST00000557258 NOP53Q9NZM5 478 aaKnown RBP19.64■□□□□ 0.73
FOXN3-214ENST00000557258 COPG2Q9UBF2 871 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 LNPEPQ9UIQ6 1025 aa19.64■□□□□ 0.73
FOXN3-214ENST00000557258 NCAM2O15394 837 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 HCAR3P49019 387 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 GATMP50440 423 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 MPP1Q00013 466 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 MPP3Q13368 585 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 SEPT6Q14141 434 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 ITPRIPL1Q6GPH6 555 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 TRIM42Q8IWZ5 723 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 DTX3LQ8TDB6 740 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 BRD8Q9H0E9 1235 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 TK2O00142 265 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 CA12O43570 354 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 USP1O94782 785 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 VAPBO95292 243 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 GRM3Q14832 879 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 CYS1Q717R9 158 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 CIR1Q86X95 450 aaPredicted RBP19.63■□□□□ 0.73
FOXN3-214ENST00000557258 CCNJLQ8IV13 435 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 SLC25A41Q8N5S1 370 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 VPS39Q96JC1 886 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 KLHL5Q96PQ7 755 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 SORT1Q99523 831 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 UPF3AQ9H1J1 476 aaKnown RBP19.63■□□□□ 0.73
FOXN3-214ENST00000557258 DCDC2Q9UHG0 476 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 MCM8Q9UJA3 840 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 SLC27A5Q9Y2P5 690 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 C15orf41Q9Y2V0 281 aa19.63■□□□□ 0.73
FOXN3-214ENST00000557258 BIRC5O15392 142 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 HLA-DQB2P05538 268 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 CALB2P22676 271 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 CCR1P32246 355 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 LIMK2P53671 638 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 TEX9Q8N6V9 391 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 RBM15BQ8NDT2 890 aaKnown RBP19.62■□□□□ 0.73
FOXN3-214ENST00000557258 PIWIL2Q8TC59 973 aaKnown RBP19.62■□□□□ 0.73
FOXN3-214ENST00000557258 N4BP2L2Q92802 583 aaPredicted RBP19.62■□□□□ 0.73
FOXN3-214ENST00000557258 WWP1Q9H0M0 922 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 HS3ST4Q9Y661 456 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 CCL22O00626 93 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 TRAFD1O14545 582 aaPredicted RBP19.62■□□□□ 0.73
FOXN3-214ENST00000557258 TNFRSF10BO14763 440 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 MAFKO60675 156 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 CYP11A1P05108 521 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 C2P06681 752 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 FAM163BP0C2L3 166 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 RALBP11234 206 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 SPRP35270 261 aaPredicted RBP19.62■□□□□ 0.73
FOXN3-214ENST00000557258 MAP2K2P36507 400 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 MXRA7P84157 204 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 GRTP1Q5TC63 336 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 ESRP1Q6NXG1 681 aaKnown RBP19.62■□□□□ 0.73
FOXN3-214ENST00000557258 URGCPQ8TCY9 931 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 SUSD3Q96L08 255 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 EBF2Q9HAK2 575 aa19.62■□□□□ 0.73
FOXN3-214ENST00000557258 RBM22Q9NW64 420 aaKnown RBP eCLIP19.62■□□□□ 0.731e-6■■□□□ 11.4
FOXN3-214ENST00000557258 GJB3O75712 270 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms