RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 AKR1A1P14550 325 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 DARSP14868 501 aaKnown RBP4.69□□□□□ -1.66
SRP54-212ENST00000556992 ATF7P17544 494 aaPredicted RBP4.69□□□□□ -1.66
SRP54-212ENST00000556992 ARF4P18085 180 aaPredicted RBP4.69□□□□□ -1.66
SRP54-212ENST00000556992 CTNNA2P26232 953 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 HOXD10P28358 340 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 HOXA11P31270 313 aaPredicted RBP4.69□□□□□ -1.66
SRP54-212ENST00000556992 CETN2P41208 172 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 PSMC4P43686 418 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 ZNF132P52740 706 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 SNX16P57768 344 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 OSTNP61366 133 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 NOP14P78316 857 aaKnown RBP4.69□□□□□ -1.66
SRP54-212ENST00000556992 LACTBP83111 547 aaPredicted RBP4.69□□□□□ -1.66
SRP54-212ENST00000556992 TAP1Q03518 808 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 NOGQ13253 232 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 MESDQ14696 234 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 TMEM132DQ14C87 1099 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 LONRF2Q1L5Z9 754 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 ZNF667Q5HYK9 610 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 BEND6Q5SZJ8 279 aaPredicted RBP4.69□□□□□ -1.66
SRP54-212ENST00000556992 FOXB2Q5VYV0 432 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 GRAMD4Q6IC98 578 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 TAF2Q6P1X5 1199 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 NOTUMQ6P988 496 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 SLC27A1Q6PCB7 646 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 SPATC1Q76KD6 591 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 CXXC5Q7LFL8 322 aaKnown RBP4.69□□□□□ -1.66
SRP54-212ENST00000556992 CATSPER4Q7RTX7 472 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 RSPH3Q86UC2 560 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 PALB2Q86YC2 1186 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 PHF13Q86YI8 300 aaPredicted RBP4.69□□□□□ -1.66
SRP54-212ENST00000556992 KRT222Q8N1A0 295 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 RASGEF1CQ8N431 466 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 UBR7Q8N806 425 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 WDR48Q8TAF3 677 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 MAIP1Q8WWC4 291 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 ZNF606Q8WXB4 792 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 ZNF653Q96CK0 615 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 ARHGEF26Q96DR7 871 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 ZBTB10Q96DT7 871 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 CYFIP2Q96F07 1278 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 HPDLQ96IR7 371 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 MS4A14Q96JA4 679 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 ZNF668Q96K58 619 aaPredicted RBP4.69□□□□□ -1.66
SRP54-212ENST00000556992 RUNDC3BQ96NL0 473 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 PNKPQ96T60 521 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 PSMB7Q99436 277 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 MTG1Q9BT17 334 aaPredicted RBP4.69□□□□□ -1.66
SRP54-212ENST00000556992 LRRC1Q9BTT6 524 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 NUP85Q9BW27 656 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 FUT8Q9BYC5 575 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 MTMR12Q9C0I1 747 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 MIS12Q9H081 205 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 FAM49AQ9H0Q0 323 aaPredicted RBP4.69□□□□□ -1.66
SRP54-212ENST00000556992 LHX5Q9H2C1 402 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 NELFAQ9H3P2 528 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 VIPAS39Q9H9C1 493 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 CISHQ9NSE2 258 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 ZNF446Q9NWS9 450 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 DPP3Q9NY33 737 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 FLRT1Q9NZU1 646 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 ADAM22Q9P0K1 906 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 CNOT8Q9UFF9 292 aaKnown RBP4.69□□□□□ -1.66
SRP54-212ENST00000556992 FEZ2Q9UHY8 353 aaPredicted RBP4.69□□□□□ -1.66
SRP54-212ENST00000556992 ITGA11Q9UKX5 1188 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 MTUS1Q9ULD2 1270 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 L1RE1Q9UN81 338 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 CEP83Q9Y592 693 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 PCDHA3Q9Y5H8 950 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 SCINQ9Y6U3 715 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 PTPRJQ12913 1337 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 MROH7Q68CQ1 1323 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 MYH4Q9Y623 1939 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 ARFGEF1Q9Y6D6 1849 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 A0A1W2PRX2 142 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 M0QZ92 97 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 MAP2K7O14733 419 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 KLF4O43474 513 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 XPOTO43592 962 aaKnown RBP4.68□□□□□ -1.66
SRP54-212ENST00000556992 SPOPO43791 374 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 CSDE1O75534 798 aaKnown RBP4.68□□□□□ -1.66
SRP54-212ENST00000556992 PROSCO94903 275 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 CD4P01730 458 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 FGGP02679 453 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 TFRCP02786 760 aaKnown RBP4.68□□□□□ -1.66
SRP54-212ENST00000556992 CXCL8P10145 99 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 RARBP10826 455 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 CD58P19256 250 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 MMP8P22894 467 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 RRM1P23921 792 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 TNFRSF8P28908 595 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 MAN1A1P33908 653 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 PNPLA4P41247 253 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 PEX5P50542 639 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 DNA2P51530 1060 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 RWDD2BP57060 319 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 RNASE9P60153 205 aaKnown RBP4.68□□□□□ -1.66
SRP54-212ENST00000556992 VSNL1P62760 191 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 FAM193AP78312 1265 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms