RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 CPXM2Q8N436 756 aa13.16□□□□□ -0.3
PSEN1-219ENST00000556951 KAT5Q92993 513 aa13.16□□□□□ -0.3
PSEN1-219ENST00000556951 PPP1R13BQ96KQ4 1090 aa13.16□□□□□ -0.3
PSEN1-219ENST00000556951 TWNKQ96RR1 684 aa13.16□□□□□ -0.3
PSEN1-219ENST00000556951 ELF4Q99607 663 aaPredicted RBP13.16□□□□□ -0.3
PSEN1-219ENST00000556951 DESI2Q9BSY9 194 aa13.16□□□□□ -0.3
PSEN1-219ENST00000556951 CIPCQ9C0C6 399 aa13.16□□□□□ -0.3
PSEN1-219ENST00000556951 BTBD1Q9H0C5 482 aa13.16□□□□□ -0.3
PSEN1-219ENST00000556951 HAUS4Q9H6D7 363 aa13.16□□□□□ -0.3
PSEN1-219ENST00000556951 APOBEC3GQ9HC16 384 aaKnown RBP13.16□□□□□ -0.3
PSEN1-219ENST00000556951 RRAGDQ9NQL2 400 aaPredicted RBP13.16□□□□□ -0.3
PSEN1-219ENST00000556951 ARID1BQ8NFD5 2236 aaPredicted RBP13.16□□□□□ -0.3
PSEN1-219ENST00000556951 TLN1Q9Y490 2541 aaKnown RBP13.15□□□□□ -0.3
PSEN1-219ENST00000556951 A0A1W2PR77 199 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 USP27XA6NNY8 438 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 BRINP1O60477 761 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 TUBB4AP04350 444 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 HMBSP08397 361 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 CDK4P11802 303 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 HLA-FP30511 346 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 CORO1AP31146 461 aaKnown RBP13.15□□□□□ -0.3
PSEN1-219ENST00000556951 COG7P83436 770 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 PTK2Q05397 1052 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 BNIP3Q12983 259 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 CUL2Q13617 745 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 ZNF699Q32M78 642 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 TBC1D25Q3MII6 688 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 KIAA0895LQ68EN5 471 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 KANSL1Q7Z3B3 1105 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 ZNF571Q7Z3V5 609 aaPredicted RBP13.15□□□□□ -0.3
PSEN1-219ENST00000556951 ADIPOR2Q86V24 386 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 UNC93AQ86WB7 457 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 DENND1CQ8IV53 801 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 TXLNBQ8N3L3 684 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 ZNF248Q8NDW4 579 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 CYB5D2Q8WUJ1 264 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 DCLK3Q9C098 648 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 MTG2Q9H4K7 406 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 CLIC5Q9NZA1 410 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 NAGPAQ9UK23 515 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 CELSR2Q9HCU4 2923 aa13.15□□□□□ -0.3
PSEN1-219ENST00000556951 PLXNA2O75051 1894 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 A0A1W2PPC4 97 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 BLACEA4D250 179 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 FAM200BP0CF97 657 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 ELAVL4P26378 380 aaKnown RBP13.14□□□□□ -0.31
PSEN1-219ENST00000556951 HOXD9P28356 352 aaPredicted RBP13.14□□□□□ -0.31
PSEN1-219ENST00000556951 USP8P40818 1118 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 GALCP54803 685 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 BPIFB4P59827 614 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 YWHAEP62258 255 aaKnown RBP13.14□□□□□ -0.31
PSEN1-219ENST00000556951 NFKB2Q00653 900 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 ZBTB16Q05516 673 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 VAC14Q08AM6 782 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 EFEMP1Q12805 493 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 E2F5Q15329 346 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 SLC18A3Q16572 532 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 SPOPLQ6IQ16 392 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 ZNF662Q6ZS27 426 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 EID2Q8N6I1 236 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 ACRBPQ8NEB7 543 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 RFFLQ8WZ73 363 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 CYFIP2Q96F07 1278 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 SLC6A18Q96N87 628 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.14□□□□□ -0.31
PSEN1-219ENST00000556951 SLC4A5Q9BY07 1137 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 NIF3L1Q9GZT8 377 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 SGK2Q9HBY8 427 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 PNPLA8Q9NP80 782 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 LUC7LQ9NQ29 371 aaKnown RBP13.14□□□□□ -0.31
PSEN1-219ENST00000556951 SERGEFQ9UGK8 458 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 RASAL2Q9UJF2 1139 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 REXO2Q9Y3B8 237 aaKnown RBP13.14□□□□□ -0.31
PSEN1-219ENST00000556951 PCDHA13Q9Y5I0 950 aa13.14□□□□□ -0.31
PSEN1-219ENST00000556951 KIF2AO00139 706 aaPredicted RBP13.13□□□□□ -0.31
PSEN1-219ENST00000556951 ITGAVP06756 1048 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 PNMA6AP0CW24 399 aaPredicted RBP13.13□□□□□ -0.31
PSEN1-219ENST00000556951 KRT5P13647 590 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 P4HA1P13674 534 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 TNFAIP3P21580 790 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 CLCN1P35523 988 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 MAGEA1P43355 309 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 ASPAP45381 313 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 PSEN1P49768 467 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 BCAT1P54687 386 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 PDE4CQ08493 712 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 INAVAQ3KP66 663 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 NYAP1Q6ZVC0 841 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 CHST9Q7L1S5 443 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 KIAA1328Q86T90 577 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.13□□□□□ -0.31
PSEN1-219ENST00000556951 DDI1Q8WTU0 396 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 MYO19Q96H55 970 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 AGPAT1Q99943 283 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 ACE2Q9BYF1 805 aaPredicted RBP13.13□□□□□ -0.31
PSEN1-219ENST00000556951 ADAMTS1Q9UHI8 967 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 CNTN6Q9UQ52 1028 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 OTOGQ6ZRI0 2925 aa13.13□□□□□ -0.31
PSEN1-219ENST00000556951 CRYBG3Q68DQ2 2970 aa13.12□□□□□ -0.31
PSEN1-219ENST00000556951 CLSTN1O94985 981 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms