RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 MIPP30301 263 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 CASQ1P31415 396 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 SDC4P31431 198 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 MATKP42679 507 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 ARL4DP49703 201 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 ZNF143P52747 638 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-244ENST00000556898 ETF1P62495 437 aaKnown RBP5.5□□□□□ -1.53
ATXN3-244ENST00000556898 SLC25A11Q02978 314 aaKnown RBP5.5□□□□□ -1.53
ATXN3-244ENST00000556898 DEUP1Q05D60 604 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 VEPH1Q14D04 833 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 TEAD2Q15562 447 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 TAF12Q16514 161 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 SMTNL2Q2TAL5 461 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 ZC3H12AQ5D1E8 599 aaKnown RBP5.5□□□□□ -1.53
ATXN3-244ENST00000556898 FAM182AQ5T1J6 154 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 DCAF12L1Q5VU92 463 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 TXNDC8Q6A555 127 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 C11orf63Q6NUN7 778 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 CCDC149Q6ZUS6 474 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 GAREM2Q75VX8 874 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 PEX26Q7Z412 305 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 BNIPLQ7Z465 357 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 FAM131BQ86XD5 332 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 ZDHHC17Q8IUH5 632 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 SCML4Q8N228 414 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 PYROXD2Q8N2H3 581 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 TXLNBQ8N3L3 684 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 DCLK2Q8N568 766 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 NETO2Q8NC67 525 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 ITFG1Q8TB96 612 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 COG1Q8WTW3 980 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 ING5Q8WYH8 240 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 IRGQQ8WZA9 623 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 ALG3Q92685 438 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 GATA6Q92908 595 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 CD101Q93033 1021 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 MS4A14Q96JA4 679 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 ZNF512Q96ME7 567 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-244ENST00000556898 ZSWIM3Q96MP5 696 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 CNPY3Q9BT09 278 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 ATXN3LQ9H3M9 355 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 FBXO44Q9H4M3 255 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 FAM204AQ9H8W3 233 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 KCNK12Q9HB15 430 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 POPDC2Q9HBU9 364 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 TRPC7Q9HCX4 862 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 GKN1Q9NS71 199 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 PIGVQ9NUD9 493 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.5□□□□□ -1.53
ATXN3-244ENST00000556898 ASNSD1Q9NWL6 643 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 HSFX1Q9UBD0 423 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 STK39Q9UEW8 545 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 IP6K2Q9UHH9 426 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 XPO7Q9UIA9 1087 aaKnown RBP5.5□□□□□ -1.53
ATXN3-244ENST00000556898 AMFRQ9UKV5 643 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 DUSP12Q9UNI6 340 aa5.5□□□□□ -1.53
ATXN3-244ENST00000556898 GOLGA6L7A0A1B0GV03 622 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 TCRBV7S2A1N4TA0A589 114 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 SLC12A8A0AV02 714 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 FAM170BA6NMN3 283 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 PRR5-ARHGAP8B1AHC4 643 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 IRAK2O43187 625 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 COCHO43405 550 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 TLR5O60602 858 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 ENDOD1O94919 500 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 IGLV3-25P01717 112 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 KRT1P04264 644 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 RHOP08100 348 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 GLI1P08151 1106 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 SP9P0CG40 484 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 PYGMP11217 842 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 CEBPBP17676 345 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 PTPN2P17706 415 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 CTNNA2P26232 953 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 MAN1A1P33908 653 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 RDXP35241 583 aaKnown RBP5.49□□□□□ -1.53
ATXN3-244ENST00000556898 PTPN9P43378 593 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 PEX5P50542 639 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 SNX16P57768 344 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 ARHGAP8P85298 464 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 ZXDBP98169 803 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 AMPD2Q01433 879 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 ADCY2Q08462 1091 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 EIF4EBP2Q13542 120 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-244ENST00000556898 PIGHQ14442 188 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-244ENST00000556898 RPS6KA1Q15418 735 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 ST3GAL2Q16842 350 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 SLC25A52Q3SY17 297 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 C10orf120Q5SQS8 335 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 RSRC2Q7L4I2 434 aaKnown RBP5.49□□□□□ -1.53
ATXN3-244ENST00000556898 GPR149Q86SP6 731 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 C14orf80Q86SX3 495 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 ITIH5Q86UX2 942 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 MON1AQ86VX9 555 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 MIB1Q86YT6 1006 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 C1orf210Q8IVY1 113 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 NIPA2Q8N8Q9 360 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 ARL14EPQ8N8R7 260 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-244ENST00000556898 C2CD4AQ8NCU7 369 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-244ENST00000556898 LRRN4CLQ8ND94 238 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms