RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 TBC1D31Q96DN5 1066 aa23.08■■□□□ 1.29
PABPN1-206ENST00000556809 SIPA1Q96FS4 1042 aa23.08■■□□□ 1.29
PABPN1-206ENST00000556809 EPAS1Q99814 870 aa23.08■■□□□ 1.29
PABPN1-206ENST00000556809 FEM1AQ9BSK4 669 aa23.08■■□□□ 1.29
PABPN1-206ENST00000556809 MTG2Q9H4K7 406 aa23.08■■□□□ 1.29
PABPN1-206ENST00000556809 DHX35Q9H5Z1 703 aaKnown RBP23.08■■□□□ 1.29
PABPN1-206ENST00000556809 ZNF212Q9UDV6 495 aa23.08■■□□□ 1.29
PABPN1-206ENST00000556809 SLCO3A1Q9UIG8 710 aa23.08■■□□□ 1.29
PABPN1-206ENST00000556809 NEU3Q9UQ49 428 aa23.08■■□□□ 1.29
PABPN1-206ENST00000556809 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.08■■□□□ 1.29
PABPN1-206ENST00000556809 NYNRINQ9P2P1 1898 aaKnown RBP23.08■■□□□ 1.29
PABPN1-206ENST00000556809 SPTBN4Q9H254 2564 aa23.07■■□□□ 1.28
PABPN1-206ENST00000556809 A0A0A6YYK5 440 aaPredicted RBP23.07■■□□□ 1.28
PABPN1-206ENST00000556809 TMEM110-MUSTN1A8MSY1 372 aa23.07■■□□□ 1.28
PABPN1-206ENST00000556809 IGLV3-19P01714 112 aa23.07■■□□□ 1.28
PABPN1-206ENST00000556809 PTGER3P43115 390 aa23.07■■□□□ 1.28
PABPN1-206ENST00000556809 SSR1P43307 286 aaKnown RBP23.07■■□□□ 1.28
PABPN1-206ENST00000556809 VASPP50552 380 aaPredicted RBP23.07■■□□□ 1.28
PABPN1-206ENST00000556809 VAV2P52735 878 aa23.07■■□□□ 1.28
PABPN1-206ENST00000556809 CREB5Q02930 508 aa23.07■■□□□ 1.28
PABPN1-206ENST00000556809 SLC25A11Q02978 314 aaKnown RBP23.07■■□□□ 1.28
PABPN1-206ENST00000556809 LMNB2Q03252 620 aa23.07■■□□□ 1.28
PABPN1-206ENST00000556809 SEMA3BQ13214 749 aa23.07■■□□□ 1.28
PABPN1-206ENST00000556809 CA9Q16790 459 aa23.07■■□□□ 1.28
PABPN1-206ENST00000556809 BOLA3Q53S33 107 aa23.07■■□□□ 1.28
PABPN1-206ENST00000556809 RWDD4Q6NW29 188 aaKnown RBP23.07■■□□□ 1.28
PABPN1-206ENST00000556809 SLC36A4Q6YBV0 504 aa23.07■■□□□ 1.28
PABPN1-206ENST00000556809 TFAP2DQ7Z6R9 452 aa23.07■■□□□ 1.28
PABPN1-206ENST00000556809 PRCCQ92733 491 aaPredicted RBP23.07■■□□□ 1.28
PABPN1-206ENST00000556809 DESI2Q9BSY9 194 aa23.07■■□□□ 1.28
PABPN1-206ENST00000556809 ZWILCHQ9H900 591 aa23.07■■□□□ 1.28
PABPN1-206ENST00000556809 FBRSQ9HAH7 460 aa23.07■■□□□ 1.28
PABPN1-206ENST00000556809 RCCD1A6NED2 376 aa23.06■■□□□ 1.28
PABPN1-206ENST00000556809 CREB3O43889 395 aa23.06■■□□□ 1.28
PABPN1-206ENST00000556809 NOP2P46087 812 aaKnown RBP23.06■■□□□ 1.28
PABPN1-206ENST00000556809 DHPSP49366 369 aaPredicted RBP23.06■■□□□ 1.28
PABPN1-206ENST00000556809 TPMTP51580 245 aa23.06■■□□□ 1.28
PABPN1-206ENST00000556809 HADHBP55084 474 aaKnown RBP23.06■■□□□ 1.28
PABPN1-206ENST00000556809 ST8SIA6P61647 398 aa23.06■■□□□ 1.28
PABPN1-206ENST00000556809 SULT2A1Q06520 285 aa23.06■■□□□ 1.28
PABPN1-206ENST00000556809 HADHQ16836 314 aaKnown RBP23.06■■□□□ 1.28
PABPN1-206ENST00000556809 SMTNL2Q2TAL5 461 aa23.06■■□□□ 1.28
PABPN1-206ENST00000556809 KIAA1328Q86T90 577 aa23.06■■□□□ 1.28
PABPN1-206ENST00000556809 CPNE8Q86YQ8 564 aa23.06■■□□□ 1.28
PABPN1-206ENST00000556809 RPL10LQ96L21 214 aaKnown RBP23.06■■□□□ 1.28
PABPN1-206ENST00000556809 VPS45Q9NRW7 570 aa23.06■■□□□ 1.28
PABPN1-206ENST00000556809 WSB2Q9NYS7 404 aaPredicted RBP23.06■■□□□ 1.28
PABPN1-206ENST00000556809 CEP250Q9BV73 2442 aa23.06■■□□□ 1.28
PABPN1-206ENST00000556809 DCHS1Q96JQ0 3298 aa23.05■■□□□ 1.28
PABPN1-206ENST00000556809 TTC34A8MYJ7 566 aa23.05■■□□□ 1.28
PABPN1-206ENST00000556809 PRR5-ARHGAP8B1AHC4 643 aa23.05■■□□□ 1.28
PABPN1-206ENST00000556809 ARHGAP6O43182 974 aa23.05■■□□□ 1.28
PABPN1-206ENST00000556809 FOXD2O60548 495 aaPredicted RBP23.05■■□□□ 1.28
PABPN1-206ENST00000556809 RHOQP17081 205 aa23.05■■□□□ 1.28
PABPN1-206ENST00000556809 EPHB2P29323 1055 aa23.05■■□□□ 1.28
PABPN1-206ENST00000556809 OR1E1P30953 314 aa23.05■■□□□ 1.28
PABPN1-206ENST00000556809 HTR7P34969 479 aa23.05■■□□□ 1.28
PABPN1-206ENST00000556809 NUMBP49757 651 aa23.05■■□□□ 1.28
PABPN1-206ENST00000556809 STK19P49842 368 aaPredicted RBP23.05■■□□□ 1.28
PABPN1-206ENST00000556809 RPS14P62263 151 aaKnown RBP23.05■■□□□ 1.28
PABPN1-206ENST00000556809 ARHGAP8P85298 464 aa23.05■■□□□ 1.28
PABPN1-206ENST00000556809 RPL6Q02878 288 aaKnown RBP23.05■■□□□ 1.28
PABPN1-206ENST00000556809 SF3A2Q15428 464 aaKnown RBP23.05■■□□□ 1.28
PABPN1-206ENST00000556809 KCNT1Q5JUK3 1230 aa23.05■■□□□ 1.28
PABPN1-206ENST00000556809 C9orf64Q5T6V5 341 aa23.05■■□□□ 1.28
PABPN1-206ENST00000556809 TXNRD3NBQ6F5E7 133 aa23.05■■□□□ 1.28
PABPN1-206ENST00000556809 SETD3Q86TU7 594 aaPredicted RBP23.05■■□□□ 1.28
PABPN1-206ENST00000556809 TEKT4Q8WW24 435 aa23.05■■□□□ 1.28
PABPN1-206ENST00000556809 RMDN1Q96DB5 314 aa23.05■■□□□ 1.28
PABPN1-206ENST00000556809 PPP1R9BQ96SB3 815 aa23.05■■□□□ 1.28
PABPN1-206ENST00000556809 KCTD15Q96SI1 283 aaPredicted RBP23.05■■□□□ 1.28
PABPN1-206ENST00000556809 RSPH9Q9H1X1 276 aaPredicted RBP23.05■■□□□ 1.28
PABPN1-206ENST00000556809 SMOC1Q9H4F8 434 aa23.05■■□□□ 1.28
PABPN1-206ENST00000556809 RETREG1Q9H6L5 497 aa23.05■■□□□ 1.28
PABPN1-206ENST00000556809 CHD5Q8TDI0 1954 aa23.04■■□□□ 1.28
PABPN1-206ENST00000556809 TARSL2A2RTX5 802 aaKnown RBP23.04■■□□□ 1.28
PABPN1-206ENST00000556809 PJA2O43164 708 aa23.04■■□□□ 1.28
PABPN1-206ENST00000556809 SIN3BO75182 1162 aa23.04■■□□□ 1.28
PABPN1-206ENST00000556809 RHOCP08134 193 aa23.04■■□□□ 1.28
PABPN1-206ENST00000556809 RARAP10276 462 aa23.04■■□□□ 1.28
PABPN1-206ENST00000556809 CD6P30203 668 aa23.04■■□□□ 1.28
PABPN1-206ENST00000556809 TPI1P60174 286 aa23.04■■□□□ 1.28
PABPN1-206ENST00000556809 PPP6R3Q5H9R7 873 aaPredicted RBP23.04■■□□□ 1.28
PABPN1-206ENST00000556809 C6orf118Q5T5N4 469 aa23.04■■□□□ 1.28
PABPN1-206ENST00000556809 PEAR1Q5VY43 1037 aaPredicted RBP23.04■■□□□ 1.28
PABPN1-206ENST00000556809 RNF219Q5W0B1 726 aaPredicted RBP23.04■■□□□ 1.28
PABPN1-206ENST00000556809 ARMCX6Q7L4S7 300 aa23.04■■□□□ 1.28
PABPN1-206ENST00000556809 NLRP14Q86W24 1093 aa23.04■■□□□ 1.28
PABPN1-206ENST00000556809 SLC41A1Q8IVJ1 513 aa23.04■■□□□ 1.28
PABPN1-206ENST00000556809 TXLNBQ8N3L3 684 aa23.04■■□□□ 1.28
PABPN1-206ENST00000556809 HSPH1Q92598 858 aa23.04■■□□□ 1.28
PABPN1-206ENST00000556809 PTPRN2Q92932 1015 aa23.04■■□□□ 1.28
PABPN1-206ENST00000556809 ZNF419Q96HQ0 510 aaPredicted RBP23.04■■□□□ 1.28
PABPN1-206ENST00000556809 PSMB7Q99436 277 aa23.04■■□□□ 1.28
PABPN1-206ENST00000556809 LACRTQ9GZZ8 138 aa23.04■■□□□ 1.28
PABPN1-206ENST00000556809 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.04■■□□□ 1.28
PABPN1-206ENST00000556809 TMEM74BQ9NUR3 256 aa23.04■■□□□ 1.28
PABPN1-206ENST00000556809 TMEM248Q9NWD8 314 aa23.04■■□□□ 1.28
PABPN1-206ENST00000556809 DLL3Q9NYJ7 618 aa23.04■■□□□ 1.28
PABPN1-206ENST00000556809 BTNL10A8MVZ5 291 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms