RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 CDH16O75309 829 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 SEC22BO75396 215 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 SURF6O75683 361 aaKnown RBP6.32□□□□□ -1.4
TDP1-215ENST00000556498 SOAT2O75908 522 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 PIAS2O75928 621 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 GCNT3O95395 438 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 SNRPA1P09661 255 aaKnown RBP6.32□□□□□ -1.4
TDP1-215ENST00000556498 TFPTP0C1Z6 253 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 GALP22466 123 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 CHMP24386 653 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 MAT2AP31153 395 aaKnown RBP6.32□□□□□ -1.4
TDP1-215ENST00000556498 TALDO1P37837 337 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 GRIK1P39086 918 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 VHLP40337 213 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 WNT5AP41221 380 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 NPTX2P47972 431 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 HOXA1P49639 335 aaPredicted RBP6.32□□□□□ -1.4
TDP1-215ENST00000556498 TUBP50607 506 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 SUCLG1P53597 346 aaKnown RBP6.32□□□□□ -1.4
TDP1-215ENST00000556498 RAD23BP54727 409 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 NUP107P57740 925 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 NAA20P61599 178 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 ARF5P84085 180 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 DSC2Q02487 901 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 GHRHRQ02643 423 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 C2orf54Q08AI8 447 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 TRAF2Q12933 501 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 FADDQ13158 208 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 RAB33AQ14088 237 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 CLCA4Q14CN2 919 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 VEPH1Q14D04 833 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 MORF4L2Q15014 288 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 TGFBIQ15582 683 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 ZYXQ15942 572 aaKnown RBP6.32□□□□□ -1.4
TDP1-215ENST00000556498 DNAL1Q4LDG9 190 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 USP39Q53GS9 565 aaKnown RBP6.32□□□□□ -1.4
TDP1-215ENST00000556498 WASHC2DQ5SRD0 308 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 PIK3R6Q5UE93 754 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 E4F1Q66K89 784 aaPredicted RBP6.32□□□□□ -1.4
TDP1-215ENST00000556498 APOA5Q6Q788 366 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 UNC5AQ6ZN44 842 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 FAM47EQ6ZV65 393 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 PTCHD4Q6ZW05 846 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 NIPA1Q7RTP0 329 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 LRP10Q7Z4F1 713 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 DNAJB7Q7Z6W7 309 aaPredicted RBP6.32□□□□□ -1.4
TDP1-215ENST00000556498 RFX6Q8HWS3 928 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 BBS7Q8IWZ6 715 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 RCOR2Q8IZ40 523 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 TRMT2AQ8IZ69 625 aaKnown RBP6.32□□□□□ -1.4
TDP1-215ENST00000556498 UBE2J2Q8N2K1 259 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 HIPK4Q8NE63 616 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 OR52N1Q8NH53 320 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 MOSPD2Q8NHP6 518 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 SYTL5Q8TDW5 730 aaPredicted RBP6.32□□□□□ -1.4
TDP1-215ENST00000556498 POF1BQ8WVV4 589 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 PHKBQ93100 1093 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 BORCS5Q969J3 196 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 OMA1Q96E52 524 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 CYFIP2Q96F07 1278 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 AHCYL2Q96HN2 611 aaKnown RBP6.32□□□□□ -1.4
TDP1-215ENST00000556498 NSMCE2Q96MF7 247 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 TOX2Q96NM4 488 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 TMEM237Q96Q45 408 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 PLIN2Q99541 437 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 CHCHD6Q9BRQ6 235 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 C1orf21Q9H246 121 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 OR51V1Q9H2C8 321 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 SLC6A15Q9H2J7 730 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 C7orf69Q9H7B7 122 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 MVB12BQ9H7P6 319 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 RNPEPL1Q9HAU8 725 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 S100A14Q9HCY8 104 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 SLC35C2Q9NQQ7 365 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 TPSG1Q9NRR2 321 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 SERINC1Q9NRX5 453 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 AGPAT3Q9NRZ7 376 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 PARVAQ9NVD7 372 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 PANK4Q9NVE7 773 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 UCKL1Q9NWZ5 548 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 RCOR3Q9P2K3 495 aaPredicted RBP6.32□□□□□ -1.4
TDP1-215ENST00000556498 CYB5R1Q9UHQ9 305 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 TINAGQ9UJW2 476 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 DIMT1Q9UNQ2 313 aaKnown RBP6.32□□□□□ -1.4
TDP1-215ENST00000556498 GPR34Q9UPC5 381 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 B3GNT3Q9Y2A9 372 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 CLASP1Q7Z460 1538 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 LRRC9Q6ZRR7 1453 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 HMX2A2RU54 273 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 RGSL1A5PLK6 1076 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 H0YJX3 145 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 K7EPI3 171 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 TOR1AO14656 332 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 FPGTO14772 594 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 IFIT3O14879 490 aaKnown RBP6.31□□□□□ -1.4
TDP1-215ENST00000556498 ANGPT2O15123 496 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 AP5Z1O43299 807 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 AQP9O43315 295 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 CHMP2AO43633 222 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 CUTAO60888 179 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms