RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SLC7A4O43246 635 aa23.19■■□□□ 1.3
ACTN1-220ENST00000556433 EEF1GP26641 437 aaKnown RBP23.19■■□□□ 1.3
ACTN1-220ENST00000556433 PPP2CBP62714 309 aa23.19■■□□□ 1.3
ACTN1-220ENST00000556433 PPP2CAP67775 309 aa23.19■■□□□ 1.3
ACTN1-220ENST00000556433 KRT83P78385 493 aa23.19■■□□□ 1.3
ACTN1-220ENST00000556433 INAVAQ3KP66 663 aa23.19■■□□□ 1.3
ACTN1-220ENST00000556433 POM121L1PQ3SYA9 428 aa23.19■■□□□ 1.3
ACTN1-220ENST00000556433 C2CD6Q53TS8 623 aa23.19■■□□□ 1.3
ACTN1-220ENST00000556433 SLC45A4Q5BKX6 768 aa23.19■■□□□ 1.3
ACTN1-220ENST00000556433 Q6ZVU0 165 aa23.19■■□□□ 1.3
ACTN1-220ENST00000556433 NOP9Q86U38 636 aaKnown RBP23.19■■□□□ 1.3
ACTN1-220ENST00000556433 PRPF39Q86UA1 669 aaKnown RBP23.19■■□□□ 1.3
ACTN1-220ENST00000556433 PIP4K2CQ8TBX8 421 aa23.19■■□□□ 1.3
ACTN1-220ENST00000556433 FAM131CQ96AQ9 280 aa23.19■■□□□ 1.3
ACTN1-220ENST00000556433 C1orf74Q96LT6 269 aa23.19■■□□□ 1.3
ACTN1-220ENST00000556433 KDM4CQ9H3R0 1056 aa23.19■■□□□ 1.3
ACTN1-220ENST00000556433 TMEM51Q9NW97 253 aa23.19■■□□□ 1.3
ACTN1-220ENST00000556433 CHD6Q8TD26 2715 aa23.19■■□□□ 1.3
ACTN1-220ENST00000556433 TMEM131Q92545 1883 aa23.19■■□□□ 1.3
ACTN1-220ENST00000556433 GOLGA8SH3BPF8 625 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 TAF4O00268 1085 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 ALOX15BO15296 676 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 LATO43561 262 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 SNAP91O60641 907 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 DKK1O94907 266 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 LSM8O95777 96 aaKnown RBP23.18■■□□□ 1.3
ACTN1-220ENST00000556433 MT-CO1P00395 513 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 CAPNS1P04632 268 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 CNTN1Q12860 1018 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 CCDC157Q569K6 752 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 TMPRSS7Q7RTY8 843 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 GATAD2AQ86YP4 633 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 ZNF683Q8IZ20 524 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 ATP11CQ8NB49 1132 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 MSANTD4Q8NCY6 345 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 CPA5Q8WXQ8 436 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 PSMB7Q99436 277 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 C2orf49Q9BVC5 232 aaPredicted RBP23.18■■□□□ 1.3
ACTN1-220ENST00000556433 GDF3Q9NR23 364 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 TMPRSS4Q9NRS4 437 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 TAB2Q9NYJ8 693 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 HS3ST2Q9Y278 367 aa23.18■■□□□ 1.3
ACTN1-220ENST00000556433 CFAP47Q6ZTR5 3102 aa23.17■■□□□ 1.3
ACTN1-220ENST00000556433 TLR4O00206 839 aa23.17■■□□□ 1.3
ACTN1-220ENST00000556433 PLRG1O43660 514 aaKnown RBP23.17■■□□□ 1.3
ACTN1-220ENST00000556433 MMEP08473 750 aa23.17■■□□□ 1.3
ACTN1-220ENST00000556433 SRCP12931 536 aa23.17■■□□□ 1.3
ACTN1-220ENST00000556433 MAT2AP31153 395 aaKnown RBP23.17■■□□□ 1.3
ACTN1-220ENST00000556433 FLT3P36888 993 aa23.17■■□□□ 1.3
ACTN1-220ENST00000556433 NAPEPLDQ6IQ20 393 aa23.17■■□□□ 1.3
ACTN1-220ENST00000556433 SETD3Q86TU7 594 aaPredicted RBP23.17■■□□□ 1.3
ACTN1-220ENST00000556433 MPP6Q9NZW5 540 aa23.17■■□□□ 1.3
ACTN1-220ENST00000556433 ARHGAP20Q9P2F6 1191 aa23.17■■□□□ 1.3
ACTN1-220ENST00000556433 FTSJ1Q9UET6 329 aa23.17■■□□□ 1.3
ACTN1-220ENST00000556433 FARP1Q9Y4F1 1045 aaPredicted RBP23.17■■□□□ 1.3
ACTN1-220ENST00000556433 PLXNA2O75051 1894 aa23.17■■□□□ 1.3
ACTN1-220ENST00000556433 F8VZ95 297 aa23.16■■□□□ 1.3
ACTN1-220ENST00000556433 SRGAP2O75044 1071 aa23.16■■□□□ 1.3
ACTN1-220ENST00000556433 ITGAVP06756 1048 aa23.16■■□□□ 1.3
ACTN1-220ENST00000556433 SHBQ15464 509 aa23.16■■□□□ 1.3
ACTN1-220ENST00000556433 ACBD5Q5T8D3 534 aaPredicted RBP23.16■■□□□ 1.3
ACTN1-220ENST00000556433 AGBL4Q5VU57 503 aa23.16■■□□□ 1.3
ACTN1-220ENST00000556433 NAA35Q5VZE5 725 aa23.16■■□□□ 1.3
ACTN1-220ENST00000556433 TFAP2DQ7Z6R9 452 aa23.16■■□□□ 1.3
ACTN1-220ENST00000556433 MFSD2AQ8NA29 543 aa23.16■■□□□ 1.3
ACTN1-220ENST00000556433 CCDC86Q9H6F5 360 aaKnown RBP23.16■■□□□ 1.3
ACTN1-220ENST00000556433 VPS51Q9UID3 782 aa23.16■■□□□ 1.3
ACTN1-220ENST00000556433 TMEM59LQ9UK28 342 aa23.16■■□□□ 1.3
ACTN1-220ENST00000556433 ASPMQ8IZT6 3477 aa23.16■■□□□ 1.3
ACTN1-220ENST00000556433 A0A0D9SEW6 157 aa23.15■■□□□ 1.3
ACTN1-220ENST00000556433 E9PAM4 449 aa23.15■■□□□ 1.3
ACTN1-220ENST00000556433 K7ERQ8 282 aa23.15■■□□□ 1.3
ACTN1-220ENST00000556433 OR1E1P30953 314 aa23.15■■□□□ 1.3
ACTN1-220ENST00000556433 NXPH1P58417 271 aa23.15■■□□□ 1.3
ACTN1-220ENST00000556433 NOMO3P69849 1222 aa23.15■■□□□ 1.3
ACTN1-220ENST00000556433 C6orf118Q5T5N4 469 aa23.15■■□□□ 1.3
ACTN1-220ENST00000556433 TRNP1Q6NT89 227 aa23.15■■□□□ 1.3
ACTN1-220ENST00000556433 PROSER1Q86XN7 944 aa23.15■■□□□ 1.3
ACTN1-220ENST00000556433 ENOX1Q8TC92 643 aaKnown RBP23.15■■□□□ 1.3
ACTN1-220ENST00000556433 EPS8L1Q8TE68 723 aa23.15■■□□□ 1.3
ACTN1-220ENST00000556433 SAP25Q8TEE9 199 aa23.15■■□□□ 1.3
ACTN1-220ENST00000556433 CCDC114Q96M63 670 aa23.15■■□□□ 1.3
ACTN1-220ENST00000556433 CFAP57Q96MR6 1250 aa23.15■■□□□ 1.3
ACTN1-220ENST00000556433 HAPLN3Q96S86 360 aa23.15■■□□□ 1.3
ACTN1-220ENST00000556433 VPS16Q9H269 839 aa23.15■■□□□ 1.3
ACTN1-220ENST00000556433 DMTF1Q9Y222 760 aa23.15■■□□□ 1.3
ACTN1-220ENST00000556433 PLXNB3Q9ULL4 1909 aa23.14■■□□□ 1.3
ACTN1-220ENST00000556433 IGLV3-10A0A075B6K4 115 aa23.14■■□□□ 1.29
ACTN1-220ENST00000556433 YKT6O15498 198 aa23.14■■□□□ 1.29
ACTN1-220ENST00000556433 SMAD6O43541 496 aaKnown RBP23.14■■□□□ 1.29
ACTN1-220ENST00000556433 GFPT2O94808 682 aa23.14■■□□□ 1.29
ACTN1-220ENST00000556433 RRM1P23921 792 aa23.14■■□□□ 1.29
ACTN1-220ENST00000556433 CHRNA3P32297 505 aa23.14■■□□□ 1.29
ACTN1-220ENST00000556433 NUDT1P36639 197 aa23.14■■□□□ 1.29
ACTN1-220ENST00000556433 ARRB1P49407 418 aaPredicted RBP23.14■■□□□ 1.29
ACTN1-220ENST00000556433 STAT4Q14765 748 aa23.14■■□□□ 1.29
ACTN1-220ENST00000556433 LINGO4Q6UY18 593 aa23.14■■□□□ 1.29
ACTN1-220ENST00000556433 TRIM69Q86WT6 500 aa23.14■■□□□ 1.29
ACTN1-220ENST00000556433 MARCH9Q86YJ5 346 aa23.14■■□□□ 1.29
ACTN1-220ENST00000556433 GALNT15Q8N3T1 639 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms