RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 PMS2P1A4D2B8 440 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 F5H5T6 163 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 ACTN4O43707 911 aaKnown RBP14.33□□□□□ -0.12
ACTN1-219ENST00000556432 TNFSF15O95150 251 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 PCDH8O95206 1070 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 TACR2P21452 398 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 HNRNPA2B1P22626 353 aaKnown RBP14.33□□□□□ -0.12
ACTN1-219ENST00000556432 HNRNPKP61978 463 aaKnown RBP eCLIP14.33□□□□□ -0.12
ACTN1-219ENST00000556432 ENPEPQ07075 957 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 COLEC12Q5KU26 742 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 TCERG1LQ5VWI1 586 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 OR6B2Q6IFH4 312 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 ZCCHC8Q6NZY4 707 aaKnown RBP14.33□□□□□ -0.12
ACTN1-219ENST00000556432 PMF1Q6P1K2 205 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 GUSBP11Q6P575 273 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 USP53Q70EK8 1073 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 EXD3Q8N9H8 876 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 FRS2Q8WU20 508 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 FAM131CQ96AQ9 280 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 GRAMD1AQ96CP6 724 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 NOX5Q96PH1 765 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 PPM1HQ9ULR3 514 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 PCDHA7Q9UN72 937 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 SSUH2Q9Y2M2 353 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 PCDHGA8Q9Y5G5 932 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 ENTPD2Q9Y5L3 495 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 U3KQA8 63 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 A6NNZ2 444 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 H3BM21 787 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 KPNA3O00505 521 aaPredicted RBP14.32□□□□□ -0.12
ACTN1-219ENST00000556432 FBXO21O94952 628 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 GIMD1P0DJR0 217 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 TAS2R38P59533 333 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 SKOR1P84550 965 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 CCDC15Q0P6D6 951 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 LRMPQ12912 555 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 SLC12A1Q13621 1099 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 DLG2Q15700 870 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 NFIL3Q16649 462 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 ZNF284Q2VY69 593 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 ARL13BQ3SXY8 428 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 ZC3H12AQ5D1E8 599 aaKnown RBP14.32□□□□□ -0.12
ACTN1-219ENST00000556432 DCAF17Q5H9S7 520 aaPredicted RBP14.32□□□□□ -0.12
ACTN1-219ENST00000556432 LCLAT1Q6UWP7 414 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 Q6ZSR6 202 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 TAC4Q86UU9 113 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 HORMAD1Q86X24 394 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 CCAR2Q8N163 923 aaKnown RBP14.32□□□□□ -0.12
ACTN1-219ENST00000556432 ZNF548Q8NEK5 533 aaPredicted RBP14.32□□□□□ -0.12
ACTN1-219ENST00000556432 WDR36Q8NI36 951 aaKnown RBP14.32□□□□□ -0.12
ACTN1-219ENST00000556432 ERCC4Q92889 916 aaPredicted RBP14.32□□□□□ -0.12
ACTN1-219ENST00000556432 DYRK4Q9NR20 520 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 NCKIPSDQ9NZQ3 722 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 KIAA1257Q9ULG3 409 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 NAALADL1Q9UQQ1 740 aa14.32□□□□□ -0.12
ACTN1-219ENST00000556432 FARP1Q9Y4F1 1045 aaPredicted RBP14.32□□□□□ -0.12
ACTN1-219ENST00000556432 TLN1Q9Y490 2541 aaKnown RBP14.32□□□□□ -0.12
ACTN1-219ENST00000556432 AHCTF1Q8WYP5 2266 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 CDRT15L2A8MXV6 281 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 TERTO14746 1132 aaKnown RBP14.31□□□□□ -0.12
ACTN1-219ENST00000556432 MUSKO15146 869 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 ALOX15BO15296 676 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 GABBR2O75899 941 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 GJB6O95452 261 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 NTRK1P04629 796 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 EPB41P11171 864 aaKnown RBP14.31□□□□□ -0.12
ACTN1-219ENST00000556432 OXCT1P55809 520 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 NNTQ13423 1086 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 NR0B2Q15466 257 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 DEFB133Q30KQ1 61 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 PIP5KL1Q5T9C9 394 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 ERICH6BQ5W0A0 696 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 NEK5Q6P3R8 708 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 ZNF574Q6ZN55 896 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-219ENST00000556432 JAMLQ86YT9 394 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 SLC22A18ASQ8N1D0 253 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 TPCN2Q8NHX9 752 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 SLC35F5Q8WV83 523 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 EXTL1Q92935 676 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 IFT43Q96FT9 208 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 SLC39A13Q96H72 371 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 BTN2A3PQ96KV6 586 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 ST7Q9NRC1 585 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 IPO11Q9UI26 975 aaKnown RBP14.31□□□□□ -0.12
ACTN1-219ENST00000556432 VPS28Q9UK41 221 aa14.31□□□□□ -0.12
ACTN1-219ENST00000556432 ATXN7L1Q9ULK2 861 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-219ENST00000556432 MCF2LO15068 1137 aa14.3□□□□□ -0.12
ACTN1-219ENST00000556432 ATP9BO43861 1147 aa14.3□□□□□ -0.12
ACTN1-219ENST00000556432 LZTS3O60299 673 aaPredicted RBP14.3□□□□□ -0.12
ACTN1-219ENST00000556432 BRD2P25440 801 aaKnown RBP14.3□□□□□ -0.12
ACTN1-219ENST00000556432 MAPK8IP2Q13387 824 aaPredicted RBP14.3□□□□□ -0.12
ACTN1-219ENST00000556432 RABGAP1LQ5R372 815 aa14.3□□□□□ -0.12
ACTN1-219ENST00000556432 TMEM270Q6UE05 265 aa14.3□□□□□ -0.12
ACTN1-219ENST00000556432 GCNT7Q6ZNI0 430 aa14.3□□□□□ -0.12
ACTN1-219ENST00000556432 ABI3BPQ7Z7G0 1075 aa14.3□□□□□ -0.12
ACTN1-219ENST00000556432 LMX1AQ8TE12 382 aa14.3□□□□□ -0.12
ACTN1-219ENST00000556432 TFAP2BQ92481 460 aa14.3□□□□□ -0.12
ACTN1-219ENST00000556432 PRR11Q96HE9 360 aaPredicted RBP14.3□□□□□ -0.12
ACTN1-219ENST00000556432 INTS4Q96HW7 963 aaKnown RBP14.3□□□□□ -0.12
ACTN1-219ENST00000556432 CCDC114Q96M63 670 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms