RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 PCNX2A6NKB5 2137 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 TICRRQ7Z2Z1 1910 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 IGHV1OR15-9A0A0B4J2B8 117 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 A0A1B0GTW7 788 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 C2orf78A6NCI8 922 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 CYSRT1A8MQ03 144 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 KPNA7A9QM74 516 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 E9PMD0 336 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 LEFTY2O00292 366 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 FFAR3O14843 346 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 PPP1R12AO14974 1030 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-239ENST00000556315 OGTO15294 1046 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 CYP17A1P05093 508 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 ATXN1LP0C7T5 689 aaKnown RBP5.14□□□□□ -1.59
ATXN3-239ENST00000556315 LCP1P13796 627 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 GABRG2P18507 467 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 SCP2P22307 547 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 CYP2F1P24903 491 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 CDC25AP30304 524 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 TNFSF9P41273 254 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 PPP3CCP48454 512 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 LIG4P49917 911 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 NCKAP1LP55160 1127 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 SLC7A9P82251 487 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 ATP2C1P98194 919 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-239ENST00000556315 POU5F1Q01860 360 aaKnown RBP5.14□□□□□ -1.59
ATXN3-239ENST00000556315 CFHR1Q03591 330 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 GAD2Q05329 585 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 GRIK2Q13002 908 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 RESTQ13127 1097 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 MAPK7Q13164 816 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 TRIM29Q14134 588 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 TMEM132DQ14C87 1099 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 SAFBQ15424 915 aaKnown RBP eCLIP5.14□□□□□ -1.59
ATXN3-239ENST00000556315 PLEKHN1Q494U1 663 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-239ENST00000556315 KRT79Q5XKE5 535 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 JADE1Q6IE81 842 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 FILIP1Q7Z7B0 1213 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 KIAA0907Q7Z7F0 614 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-239ENST00000556315 MTDHQ86UE4 582 aaKnown RBP5.14□□□□□ -1.59
ATXN3-239ENST00000556315 LZTR1Q8N653 840 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 PIP4K2CQ8TBX8 421 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 LEO1Q8WVC0 666 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-239ENST00000556315 DNASE2BQ8WZ79 361 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 BICD1Q96G01 975 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 RAB34Q9BZG1 259 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 PRDM16Q9HAZ2 1276 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 TMLHEQ9NVH6 421 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 DPP3Q9NY33 737 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 TRPM5Q9NZQ8 1165 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 CALCOCO1Q9P1Z2 691 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 TBC1D14Q9P2M4 693 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 GULP1Q9UBP9 304 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 CPSF3Q9UKF6 684 aaKnown RBP5.14□□□□□ -1.59
ATXN3-239ENST00000556315 PLAAQ9Y263 795 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 C2CD2Q9Y426 696 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 NFE2L3Q9Y4A8 694 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 TRAF6Q9Y4K3 522 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 PCDHGB2Q9Y5G2 931 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 VWA8A3KMH1 1905 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 CACNA1EQ15878 2313 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 DMXL2Q8TDJ6 3036 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 ABCA7Q8IZY2 2146 aa5.14□□□□□ -1.59
ATXN3-239ENST00000556315 A0A0B4J269 797 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 A0A1W2PQF6 199 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 ZNF840PA6NDX5 716 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 H7BY64 318 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 FLRT2O43155 660 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 RRP8O43159 456 aaKnown RBP5.13□□□□□ -1.59
ATXN3-239ENST00000556315 TNFSF14O43557 240 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 FAM189A1O60320 539 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 HUS1O60921 280 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 DTNBO60941 627 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 CER1O95813 267 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 MSL3P1P0C860 447 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 HLA-EP13747 358 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 HOXB2P14652 356 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 ITPKBP27987 946 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 CD6P30203 668 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 NTSR1P30989 418 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 EIF2S3P41091 472 aaKnown RBP5.13□□□□□ -1.59
ATXN3-239ENST00000556315 BCL6P41182 706 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 PNPLA4P41247 253 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 MAGEA11P43364 429 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 ZXDBP98169 803 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 MYL7Q01449 175 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 SMAD1Q15797 465 aaKnown RBP5.13□□□□□ -1.59
ATXN3-239ENST00000556315 HLA-BQ31612 363 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 CFAP221Q4G0U5 840 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 BTBD8Q5XKL5 378 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 EGFLAMQ63HQ2 1017 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 GPR155Q7Z3F1 870 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 TMPRSS12Q86WS5 348 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 DDX42Q86XP3 938 aaKnown RBP eCLIP5.13□□□□□ -1.59
ATXN3-239ENST00000556315 MARCH9Q86YJ5 346 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 SPATA2LQ8IUW3 424 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-239ENST00000556315 SFTPA1Q8IWL2 248 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 SCN4BQ8IWT1 228 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 Q8N1Y9 231 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 C4orf32Q8N8J7 132 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms