RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 THG1LQ9NWX6 298 aaKnown RBP4.94□□□□□ -1.62
ATXN3-237ENST00000556274 ARMCX3Q9UH62 379 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-237ENST00000556274 SIX4Q9UIU6 781 aa4.94□□□□□ -1.62
ATXN3-237ENST00000556274 L1RE1Q9UN81 338 aa4.94□□□□□ -1.62
ATXN3-237ENST00000556274 MAPRE3Q9UPY8 281 aa4.94□□□□□ -1.62
ATXN3-237ENST00000556274 TRAF3IP3Q9Y228 551 aa4.94□□□□□ -1.62
ATXN3-237ENST00000556274 COL6A3P12111 3177 aa4.94□□□□□ -1.62
ATXN3-237ENST00000556274 CEP192Q8TEP8 1941 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 C2CD4DB7Z1M9 353 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 IKBKBO14920 756 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 ABLIM3O94929 683 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 IL18BPO95998 194 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 CYP1A1P04798 512 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-237ENST00000556274 HNRNPA1P09651 372 aaKnown RBP eCLIP4.93□□□□□ -1.62
ATXN3-237ENST00000556274 CCDC192P0DO97 292 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 SLC9A1P19634 815 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 TYMPP19971 482 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 CDK11BP21127 795 aaKnown RBP4.93□□□□□ -1.62
ATXN3-237ENST00000556274 BDNFP23560 247 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 CYP2F1P24903 491 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 ANXA13P27216 316 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 PCSK1P29120 753 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 SDHAP31040 664 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 ATICP31939 592 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 USP8P40818 1118 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 TUFMP49411 452 aaKnown RBP4.93□□□□□ -1.62
ATXN3-237ENST00000556274 LRRC63Q05C16 580 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 PPP3CAQ08209 521 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 CETN1Q12798 172 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 GPR17Q13304 367 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 KCNC3Q14003 757 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 MYBPC2Q14324 1141 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 VEPH1Q14D04 833 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 SEPT7Q16181 437 aaKnown RBP4.93□□□□□ -1.62
ATXN3-237ENST00000556274 SOWAHAQ2M3V2 549 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 EDRF1Q3B7T1 1238 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 PABPC1LQ4VXU2 614 aaKnown RBP4.93□□□□□ -1.62
ATXN3-237ENST00000556274 MDH1BQ5I0G3 518 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 CATSPEREQ5SY80 951 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 TPGS2Q68CL5 300 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 CENPPQ6IPU0 288 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 PDZD4Q76G19 769 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-237ENST00000556274 FILIP1Q7Z7B0 1213 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 ACOT1Q86TX2 421 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 ADHFE1Q8IWW8 467 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 ELOA2Q8IYF1 753 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-237ENST00000556274 RNF168Q8IYW5 571 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-237ENST00000556274 TMEM86AQ8N2M4 240 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 LRRC52Q8N7C0 313 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 UBR7Q8N806 425 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 TDRD5Q8NAT2 981 aaKnown RBP4.93□□□□□ -1.62
ATXN3-237ENST00000556274 TXNDC5Q8NBS9 432 aaKnown RBP4.93□□□□□ -1.62
ATXN3-237ENST00000556274 SYT8Q8NBV8 401 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 SMRP1Q8NCR6 262 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 STKLD1Q8NE28 680 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 OR10T2Q8NGX3 314 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 OR2W6PQ8NHA6 318 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 WDR48Q8TAF3 677 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 ITFG1Q8TB96 612 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 GPT2Q8TD30 523 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 ADAMTS17Q8TE56 1095 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 PRUNE2Q8WUY3 3088 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 RSAD2Q8WXG1 361 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 JAKMIP2Q96AA8 810 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 BORCS6Q96GS4 357 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 SYT15Q9BQS2 421 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 RHOBTB2Q9BYZ6 727 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 ZCWPW1Q9H0M4 648 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 ZCCHC4Q9H5U6 513 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 EPHX3Q9H6B9 360 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 ZDHHC7Q9NXF8 308 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 GALNT8Q9NY28 637 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 DNMT3BQ9UBC3 853 aaKnown RBP4.93□□□□□ -1.62
ATXN3-237ENST00000556274 AFF4Q9UHB7 1163 aaKnown RBP4.93□□□□□ -1.62
ATXN3-237ENST00000556274 MUTYHQ9UIF7 546 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 FBXW11Q9UKB1 542 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 INSL5Q9Y5Q6 135 aa4.93□□□□□ -1.62
ATXN3-237ENST00000556274 MYBPHLA2RUH7 354 aa4.92□□□□□ -1.62
ATXN3-237ENST00000556274 MTMR11A4FU01 709 aa4.92□□□□□ -1.62
ATXN3-237ENST00000556274 CLDN5O00501 218 aa4.92□□□□□ -1.62
ATXN3-237ENST00000556274 ZNF197O14709 1029 aa4.92□□□□□ -1.62
ATXN3-237ENST00000556274 VNN1O95497 513 aa4.92□□□□□ -1.62
ATXN3-237ENST00000556274 GNA14O95837 355 aa4.92□□□□□ -1.62
ATXN3-237ENST00000556274 MBD3O95983 291 aa4.92□□□□□ -1.62
ATXN3-237ENST00000556274 CYP17A1P05093 508 aa4.92□□□□□ -1.62
ATXN3-237ENST00000556274 TPM2P07951 284 aa4.92□□□□□ -1.62
ATXN3-237ENST00000556274 RHOP08100 348 aa4.92□□□□□ -1.62
ATXN3-237ENST00000556274 HAPLN1P10915 354 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-237ENST00000556274 ZNF28P17035 718 aa4.92□□□□□ -1.62
ATXN3-237ENST00000556274 WARSP23381 471 aaKnown RBP4.92□□□□□ -1.62
ATXN3-237ENST00000556274 PTX3P26022 381 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-237ENST00000556274 ADORA2BP29275 332 aa4.92□□□□□ -1.62
ATXN3-237ENST00000556274 GPR15P49685 360 aa4.92□□□□□ -1.62
ATXN3-237ENST00000556274 KPNA1P52294 538 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-237ENST00000556274 NDST1P52848 882 aa4.92□□□□□ -1.62
ATXN3-237ENST00000556274 RPL10AP62906 217 aaKnown RBP4.92□□□□□ -1.62
ATXN3-237ENST00000556274 PLD1Q13393 1074 aa4.92□□□□□ -1.62
ATXN3-237ENST00000556274 NFE2Q16621 373 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-237ENST00000556274 ARHGAP15Q53QZ3 475 aa4.92□□□□□ -1.62
ATXN3-237ENST00000556274 CT47A1Q5JQC4 288 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms