RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 CNTN5O94779 1100 aa15.02□□□□□ -0.01
VPS33B-205ENST00000556096 ALDH1A2O94788 518 aa15.02□□□□□ -0.01
VPS33B-205ENST00000556096 FAM107AO95990 144 aa15.02□□□□□ -0.01
VPS33B-205ENST00000556096 INHBAP08476 426 aa15.02□□□□□ -0.01
VPS33B-205ENST00000556096 PGAM1P18669 254 aa15.02□□□□□ -0.01
VPS33B-205ENST00000556096 TACR2P21452 398 aa15.02□□□□□ -0.01
VPS33B-205ENST00000556096 MGAT1P26572 445 aa15.02□□□□□ -0.01
VPS33B-205ENST00000556096 SEC24CP53992 1094 aa15.02□□□□□ -0.01
VPS33B-205ENST00000556096 TAF12Q16514 161 aa15.02□□□□□ -0.01
VPS33B-205ENST00000556096 ALFQ53S48 1182 aa15.02□□□□□ -0.01
VPS33B-205ENST00000556096 HABP4Q5JVS0 413 aaKnown RBP15.02□□□□□ -0.01
VPS33B-205ENST00000556096 NADSYN1Q6IA69 706 aa15.02□□□□□ -0.01
VPS33B-205ENST00000556096 PLD4Q96BZ4 506 aa15.02□□□□□ -0.01
VPS33B-205ENST00000556096 MRRFQ96E11 262 aaKnown RBP15.02□□□□□ -0.01
VPS33B-205ENST00000556096 SMC6Q96SB8 1091 aa15.02□□□□□ -0.01
VPS33B-205ENST00000556096 C17orf80Q9BSJ5 609 aa15.02□□□□□ -0.01
VPS33B-205ENST00000556096 LRRC40Q9H9A6 602 aa15.02□□□□□ -0.01
VPS33B-205ENST00000556096 GLOD4Q9HC38 313 aa15.02□□□□□ -0.01
VPS33B-205ENST00000556096 UXTQ9UBK9 157 aaPredicted RBP15.02□□□□□ -0.01
VPS33B-205ENST00000556096 IPO11Q9UI26 975 aaKnown RBP15.02□□□□□ -0.01
VPS33B-205ENST00000556096 CDH23Q9H251 3354 aa15.02□□□□□ -0.01
VPS33B-205ENST00000556096 MYO18AQ92614 2054 aaKnown RBP15.01□□□□□ -0.01
VPS33B-205ENST00000556096 CHD9Q3L8U1 2897 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 PRRG1O14668 218 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 COCHO43405 550 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 ACSL4O60488 711 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 ANXA9O76027 345 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 FGF18O76093 207 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 MAPKAPK2P49137 400 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 NPY2RP49146 381 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 KCNQ1P51787 676 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 EPHB3P54753 998 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 SESN2P58004 480 aaPredicted RBP15.01□□□□□ -0.01
VPS33B-205ENST00000556096 PPARDQ03181 441 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 HNRNPDQ14103 355 aaKnown RBP15.01□□□□□ -0.01
VPS33B-205ENST00000556096 MPP2Q14168 576 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 SPARCL1Q14515 664 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 LRIT3Q3SXY7 679 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 PPP2R2DQ66LE6 453 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 NAPEPLDQ6IQ20 393 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 ZNF449Q6P9G9 518 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 LINC00523Q86TU6 105 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 CHSY1Q86X52 802 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 CNPY4Q8N129 248 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 OR52K1Q8NGK4 314 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 TTC17Q96AE7 1141 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 TIFAQ96CG3 184 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 SGSM3Q96HU1 749 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 RPRD1AQ96P16 312 aaPredicted RBP15.01□□□□□ -0.01
VPS33B-205ENST00000556096 CCT8L2Q96SF2 557 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 NACA2Q9H009 215 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 ZBP1Q9H171 429 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 NKIRAS1Q9NYS0 192 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 BFARQ9NZS9 450 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 DOCK4Q8N1I0 1966 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 SZT2Q5T011 3432 aa15.01□□□□□ -0.01
VPS33B-205ENST00000556096 A0A1W2PPC1 479 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 A0A1W2PPM1 405 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 FAM47DPA6NHR8 397 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 NDUFAB1O14561 156 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 TEX28O15482 410 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 FAM155BO75949 473 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 CTSAP10619 480 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 SLC11A2P49281 568 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 HARS2P49590 506 aaKnown RBP15□□□□□ -0.01
VPS33B-205ENST00000556096 YBEYP58557 167 aaPredicted RBP15□□□□□ -0.01
VPS33B-205ENST00000556096 SMAD3P84022 425 aaKnown RBP15□□□□□ -0.01
VPS33B-205ENST00000556096 TNK2Q07912 1038 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 TWF1Q12792 350 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 RAB30Q15771 203 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 LGSNQ5TDP6 509 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 CASC4Q6P4E1 433 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 TFAP2DQ7Z6R9 452 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 DNAJB7Q7Z6W7 309 aaPredicted RBP15□□□□□ -0.01
VPS33B-205ENST00000556096 USP33Q8TEY7 942 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 AUTS2Q8WXX7 1259 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 PSMG2Q969U7 264 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 ALKBH8Q96BT7 664 aaKnown RBP15□□□□□ -0.01
VPS33B-205ENST00000556096 FAM161BQ96MY7 647 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 RBM22Q9NW64 420 aaKnown RBP eCLIP15□□□□□ -0.01
VPS33B-205ENST00000556096 SYBUQ9NX95 663 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 INSL5Q9Y5Q6 135 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 SHROOM3Q8TF72 1996 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 GOLGA6L7A0A1B0GV03 622 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 MAGEB16A2A368 324 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 CXorf49A8MYA2 514 aaPredicted RBP15□□□□□ -0.01
VPS33B-205ENST00000556096 F5H5T6 163 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 PIAS1O75925 651 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 PEX11BO96011 259 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 OAS1P00973 400 aaKnown RBP15□□□□□ -0.01
VPS33B-205ENST00000556096 RENBPP51606 427 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 GEMP55040 296 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 PLD1Q13393 1074 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 FRG1Q14331 258 aaKnown RBP15□□□□□ -0.01
VPS33B-205ENST00000556096 PARP15Q460N3 678 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 TTC39BQ5VTQ0 682 aaPredicted RBP15□□□□□ -0.01
VPS33B-205ENST00000556096 OTOP3Q7RTS5 596 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 ITIH5Q86UX2 942 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 CTAGE3PQ8IX95 158 aa15□□□□□ -0.01
VPS33B-205ENST00000556096 PPM1NQ8N819 430 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms