RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 TBL3Q12788 808 aaKnown RBP10.89□□□□□ -0.67
ACTN1-216ENST00000556083 USP41Q3LFD5 358 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 EPC2Q52LR7 807 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 AGMOQ6ZNB7 445 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 HDDC2Q7Z4H3 204 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 MREGQ8N565 214 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 OR2W6PQ8NHA6 318 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 TRPC4APQ8TEL6 797 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 DNAJB3Q8WWF6 145 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 CD101Q93033 1021 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 MTMR9Q96QG7 549 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 BTBD10Q9BSF8 475 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 ZYG11BQ9C0D3 744 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 SERHL2Q9H4I8 314 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 SMURF2Q9HAU4 748 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 SERHLQ9NQF3 203 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 CORO1CQ9ULV4 474 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-216ENST00000556083 MRASO14807 208 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 OR6A2O95222 327 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 CYP1A2P05177 515 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 ADRA1DP25100 572 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 GRM5P41594 1212 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 FASTKQ14296 549 aaKnown RBP10.89□□□□□ -0.67
ACTN1-216ENST00000556083 STXBP5Q5T5C0 1151 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 N4BP2L1Q5TBK1 243 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-216ENST00000556083 LAYNQ6UX15 382 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 VSTM1Q6UX27 236 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 LGI2Q8N0V4 545 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 ETNPPLQ8TBG4 499 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 CXorf40AQ8TE69 158 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 PPP1R36Q96LQ0 422 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 MLPHQ9BV36 600 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-216ENST00000556083 ASAH2Q9NR71 780 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 NCANO14594 1321 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 SALL3Q9BXA9 1300 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 LACTBL1A8MY62 500 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 CCNT2O60583 730 aaKnown RBP10.88□□□□□ -0.67
ACTN1-216ENST00000556083 ITGAVP06756 1048 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 GSTM1P09488 218 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 RPL14P50914 215 aaKnown RBP10.88□□□□□ -0.67
ACTN1-216ENST00000556083 BTKQ06187 659 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 KCNMA1Q12791 1236 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 INAQ16352 499 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 LSM12Q3MHD2 195 aaKnown RBP10.88□□□□□ -0.67
ACTN1-216ENST00000556083 PMF1Q6P1K2 205 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 SH3RF1Q7Z6J0 888 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 CAMK1DQ8IU85 385 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 CCDC185Q8N715 623 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 ACOX2Q99424 681 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 MUC13Q9H3R2 512 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 OSGEPL1Q9H4B0 414 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 DUSP12Q9UNI6 340 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 TAF6LQ9Y6J9 622 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 ATG7O95352 703 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 CPSF4O95639 269 aaKnown RBP10.88□□□□□ -0.67
ACTN1-216ENST00000556083 COL6A2P12110 1019 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 CD44P16070 742 aaKnown RBP10.88□□□□□ -0.67
ACTN1-216ENST00000556083 TYMPP19971 482 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 ATP6V1B2P21281 511 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 WARSP23381 471 aaKnown RBP10.88□□□□□ -0.67
ACTN1-216ENST00000556083 KDELR1P24390 212 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 SLC12A3P55017 1021 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 ANXA8L1Q5VT79 327 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 ZNF470Q6ECI4 717 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 TTC27Q6P3X3 843 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 MZT2AQ6P582 158 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 C1orf186Q6ZWK4 172 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 EXOC3L1Q86VI1 746 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 ZDHHC13Q8IUH4 622 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 FNDC5Q8NAU1 212 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 SRFBP1Q8NEF9 429 aaKnown RBP10.88□□□□□ -0.67
ACTN1-216ENST00000556083 PNMA5Q96PV4 448 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 IL1RL2Q9HB29 575 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 CCNB1IP1Q9NPC3 277 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 CPA4Q9UI42 421 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 LEF1Q9UJU2 399 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-216ENST00000556083 SLC27A6Q9Y2P4 619 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 PCDHGB3Q9Y5G1 929 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 AK9Q5TCS8 1911 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 IQGAP1P46940 1657 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-216ENST00000556083 ZNF682O95780 498 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 PLEKP08567 350 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-216ENST00000556083 PTPRAP18433 802 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 SCTRP47872 440 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 ACTR3P61158 418 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 MAP2K5Q13163 448 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 SPIDRQ14159 915 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 CRY1Q16526 586 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 BBS12Q6ZW61 710 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 TMC3Q7Z5M5 1100 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 YTHDF3Q7Z739 585 aaKnown RBP10.88□□□□□ -0.67
ACTN1-216ENST00000556083 C11orf96Q7Z7L8 435 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 EPS8L3Q8TE67 593 aaKnown RBP10.88□□□□□ -0.67
ACTN1-216ENST00000556083 PTCD3Q96EY7 689 aaKnown RBP10.88□□□□□ -0.67
ACTN1-216ENST00000556083 AHCYL2Q96HN2 611 aaKnown RBP10.88□□□□□ -0.67
ACTN1-216ENST00000556083 TRAPPC9Q96Q05 1148 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 CLEC4MQ9H2X3 399 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-216ENST00000556083 GDF3Q9NR23 364 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 HMGXB4Q9UGU5 601 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms