RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 TTLL12Q14166 644 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-209ENST00000555609 GRM2Q14416 872 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 CLEC20AQ6ZU45 233 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 OSTM1Q86WC4 334 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 CCDC117Q8IWD4 279 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-209ENST00000555609 PLD6Q8N2A8 252 aaKnown RBP16.48■□□□□ 0.23
TUBB3-209ENST00000555609 SLC25A41Q8N5S1 370 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 ZNF781Q8N8C0 355 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 CATSPER1Q8NEC5 780 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 GDPD5Q8WTR4 605 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 PDCD6IPQ8WUM4 868 aaKnown RBP16.48■□□□□ 0.23
TUBB3-209ENST00000555609 PYDC1Q8WXC3 89 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 CDCA5Q96FF9 252 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 TSGA13Q96PP4 275 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 LBHD1Q9BQE6 289 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-209ENST00000555609 ABHD16BQ9H3Z7 469 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 WDR6Q9NNW5 1121 aaKnown RBP16.48■□□□□ 0.23
TUBB3-209ENST00000555609 PSMD13Q9UNM6 376 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 TBC1D30Q9Y2I9 924 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 HES2Q9Y543 173 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 ZBTB24O43167 697 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-209ENST00000555609 UBTFL6P0CB48 400 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-209ENST00000555609 SRGAP2BP0DMP2 458 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 RPL14P50914 215 aaKnown RBP16.48■□□□□ 0.23
TUBB3-209ENST00000555609 TKTL1P51854 596 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 DAOAP59103 153 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 CDH17Q12864 832 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 NME3Q13232 169 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 CES3Q6UWW8 571 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 DLK2Q6UY11 383 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 PAQR9Q6ZVX9 377 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 PHTF2Q8N3S3 785 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 VPS39Q96JC1 886 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 OSMRQ99650 979 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 EPAS1Q99814 870 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 KIFC1Q9BW19 673 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 GATA5Q9BWX5 397 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-209ENST00000555609 FAM49AQ9H0Q0 323 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-209ENST00000555609 RHOJQ9H4E5 214 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 C20orf96Q9NUD7 363 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-209ENST00000555609 GJD2Q9UKL4 321 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.47■□□□□ 0.23
TUBB3-209ENST00000555609 KCNK1O00180 336 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 ADCY6O43306 1168 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 ZBTB14O43829 449 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 CACNG3O60359 315 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 DDHD2O94830 711 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 AKAP5P24588 427 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 SERPINB5P36952 375 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 RBBP5Q15291 538 aaKnown RBP16.47■□□□□ 0.23
TUBB3-209ENST00000555609 SLC9B1Q4ZJI4 515 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 HSP90AA5PQ58FG0 334 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 ZNF618Q5T7W0 954 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 OGFRL1Q5TC84 451 aaPredicted RBP16.47■□□□□ 0.23
TUBB3-209ENST00000555609 VWA5B1Q5TIE3 1220 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 SYPL2Q5VXT5 272 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 SEL1L3Q68CR1 1132 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 NAPRTQ6XQN6 538 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 TMEM86AQ8N2M4 240 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 KYQ8NBH2 561 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 NCSTNQ92542 709 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 AZIN2Q96A70 460 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 TEKT5Q96M29 485 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 AGAP3Q96P47 875 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 MED10Q9BTT4 135 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 ACE2Q9BYF1 805 aaPredicted RBP16.47■□□□□ 0.23
TUBB3-209ENST00000555609 CEP41Q9BYV8 373 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 EBF3Q9H4W6 596 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 Q9H521 79 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 ZNF358Q9NW07 568 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 PIH1D1Q9NWS0 290 aaKnown RBP16.47■□□□□ 0.23
TUBB3-209ENST00000555609 ADAMTS6Q9UKP5 1117 aa16.47■□□□□ 0.23
TUBB3-209ENST00000555609 VCLP18206 1134 aa16.46■□□□□ 0.23
TUBB3-209ENST00000555609 PIK3R1P27986 724 aa16.46■□□□□ 0.23
TUBB3-209ENST00000555609 CYP2C18P33260 490 aa16.46■□□□□ 0.23
TUBB3-209ENST00000555609 CD68P34810 354 aaPredicted RBP16.46■□□□□ 0.23
TUBB3-209ENST00000555609 LHX1P48742 406 aa16.46■□□□□ 0.23
TUBB3-209ENST00000555609 PITX1P78337 314 aaPredicted RBP16.46■□□□□ 0.23
TUBB3-209ENST00000555609 USP4Q13107 963 aa16.46■□□□□ 0.23
TUBB3-209ENST00000555609 DYNC1I2Q13409 638 aaKnown RBP16.46■□□□□ 0.23
TUBB3-209ENST00000555609 SLC12A1Q13621 1099 aa16.46■□□□□ 0.23
TUBB3-209ENST00000555609 RFTN1Q14699 578 aaPredicted RBP16.46■□□□□ 0.23
TUBB3-209ENST00000555609 RAB41Q5JT25 222 aa16.46■□□□□ 0.23
TUBB3-209ENST00000555609 SH2D4BQ5SQS7 431 aa16.46■□□□□ 0.23
TUBB3-209ENST00000555609 UBXN11Q5T124 520 aa16.46■□□□□ 0.23
TUBB3-209ENST00000555609 FOXB2Q5VYV0 432 aa16.46■□□□□ 0.23
TUBB3-209ENST00000555609 TNS4Q8IZW8 715 aa16.46■□□□□ 0.23
TUBB3-209ENST00000555609 ICA1LQ8NDH6 482 aa16.46■□□□□ 0.23
TUBB3-209ENST00000555609 ZC3H15Q8WU90 426 aaKnown RBP16.46■□□□□ 0.23
TUBB3-209ENST00000555609 PTCD2Q8WV60 388 aaKnown RBP16.46■□□□□ 0.23
TUBB3-209ENST00000555609 TUBGCP5Q96RT8 1024 aa16.46■□□□□ 0.23
TUBB3-209ENST00000555609 AGAP2Q99490 1192 aa16.46■□□□□ 0.23
TUBB3-209ENST00000555609 MLPHQ9BV36 600 aaPredicted RBP16.46■□□□□ 0.23
TUBB3-209ENST00000555609 TRIM4Q9C037 500 aa16.46■□□□□ 0.23
TUBB3-209ENST00000555609 CDHR5Q9HBB8 845 aa16.46■□□□□ 0.23
TUBB3-209ENST00000555609 PIN4Q9Y237 131 aaKnown RBP16.46■□□□□ 0.23
TUBB3-209ENST00000555609 GINS2Q9Y248 185 aa16.46■□□□□ 0.23
TUBB3-209ENST00000555609 AAR2Q9Y312 384 aaKnown RBP16.46■□□□□ 0.23
TUBB3-209ENST00000555609 PTCH2Q9Y6C5 1203 aa16.46■□□□□ 0.23
TUBB3-209ENST00000555609 LOC100653049A0A140TA62 436 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms