RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 ADAT2Q7Z6V5 191 aaKnown RBP11.14□□□□□ -0.63
TDP1-212ENST00000555565 SLC47A2Q86VL8 602 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 CIR1Q86X95 450 aaPredicted RBP11.14□□□□□ -0.63
TDP1-212ENST00000555565 C1orf131Q8NDD1 294 aaKnown RBP11.14□□□□□ -0.63
TDP1-212ENST00000555565 NAF1Q96HR8 494 aaKnown RBP11.14□□□□□ -0.63
TDP1-212ENST00000555565 RPL10LQ96L21 214 aaKnown RBP11.14□□□□□ -0.63
TDP1-212ENST00000555565 ZNF578Q96N58 590 aaPredicted RBP11.14□□□□□ -0.63
TDP1-212ENST00000555565 PABPC3Q9H361 631 aaKnown RBP11.14□□□□□ -0.63
TDP1-212ENST00000555565 NDST4Q9H3R1 872 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 FAM204AQ9H8W3 233 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 SLC12A6Q9UHW9 1150 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 PCDHB1Q9Y5F3 818 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 ITIH6Q6UXX5 1313 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 NYNRINQ9P2P1 1898 aaKnown RBP11.13□□□□□ -0.63
TDP1-212ENST00000555565 SYNJ2BP-COX16A0A087WUM0 186 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 TARSL2A2RTX5 802 aaKnown RBP11.13□□□□□ -0.63
TDP1-212ENST00000555565 MID1O15344 667 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 RNASEH1O60930 286 aaKnown RBP11.13□□□□□ -0.63
TDP1-212ENST00000555565 HSF2BPO75031 334 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 DXOO77932 396 aaKnown RBP11.13□□□□□ -0.63
TDP1-212ENST00000555565 MOCS3O95396 460 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 SLC2A3P11169 496 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 MZF1P28698 734 aaPredicted RBP11.13□□□□□ -0.63
TDP1-212ENST00000555565 CD38P28907 300 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 CCR1P32246 355 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 KRT9P35527 623 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 NUMBP49757 651 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 STK19P49842 368 aaPredicted RBP11.13□□□□□ -0.63
TDP1-212ENST00000555565 PLK1P53350 603 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 CST6Q15828 149 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 HSP90AA4PQ58FG1 418 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 OR6B2Q6IFH4 312 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 CXorf57Q6NSI4 855 aaKnown RBP11.13□□□□□ -0.63
TDP1-212ENST00000555565 FBXL22Q6P050 247 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 NCEH1Q6PIU2 408 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 C11orf57Q6ZUT1 292 aaPredicted RBP11.13□□□□□ -0.63
TDP1-212ENST00000555565 USP30Q70CQ3 517 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 SLC26A9Q7LBE3 791 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 SPATS2Q86XZ4 545 aaKnown RBP11.13□□□□□ -0.63
TDP1-212ENST00000555565 FAM71AQ8IYT1 594 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 CCAR2Q8N163 923 aaKnown RBP11.13□□□□□ -0.63
TDP1-212ENST00000555565 PTPRN2Q92932 1015 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 MED8Q96G25 268 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 FAM129BQ96TA1 746 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 LGMNQ99538 433 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 TUBGCP2Q9BSJ2 902 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 ERVMER34-1Q9H9K5 563 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 PLCB1Q9NQ66 1216 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 FBXL12Q9NXK8 326 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 COX16Q9P0S2 106 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 SCML1Q9UN30 329 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 UBR5O95071 2799 aaPredicted RBP11.13□□□□□ -0.63
TDP1-212ENST00000555565 PIEZO2Q9H5I5 2752 aa11.13□□□□□ -0.63
TDP1-212ENST00000555565 DOCK9Q9BZ29 2069 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 EDDM13A0A1B0GTR0 161 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 A0A1B0GVM2 712 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 A0A1W2PP55 124 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 TCAF2A6NFQ2 919 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 YKT6O15498 198 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 SLC28A2O43868 658 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 DAB1O75553 588 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 MT-CO3P00414 261 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 PRKCSHP14314 528 aaPredicted RBP11.12□□□□□ -0.63
TDP1-212ENST00000555565 PDGFRAP16234 1089 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 ERCC5P28715 1186 aaPredicted RBP11.12□□□□□ -0.63
TDP1-212ENST00000555565 SLC8A1P32418 973 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 NOS2P35228 1153 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 GGCXP38435 758 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 CSRP3P50461 194 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 IRAK1P51617 712 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 UCNP55089 124 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 PCBP4P57723 403 aaKnown RBP11.12□□□□□ -0.63
TDP1-212ENST00000555565 NXPH1P58417 271 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 SLC6A3Q01959 620 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 CENPCQ03188 943 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 KCNMA1Q12791 1236 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 NME3Q13232 169 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 SLC12A1Q13621 1099 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 VWA3BQ502W6 1294 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 RABGAP1LQ5R372 815 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 TTC39BQ5VTQ0 682 aaPredicted RBP11.12□□□□□ -0.63
TDP1-212ENST00000555565 OTUD1Q5VV17 481 aaPredicted RBP11.12□□□□□ -0.63
TDP1-212ENST00000555565 CDCP2Q5VXM1 449 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 MMAAQ8IVH4 418 aaKnown RBP11.12□□□□□ -0.63
TDP1-212ENST00000555565 FAM114A1Q8IWE2 563 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 STK40Q8N2I9 435 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 OR52K2Q8NGK3 314 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 GANCQ8TET4 914 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 RNF34Q969K3 372 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 ALG14Q96F25 216 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 NOX5Q96PH1 765 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 NEUROG2Q9H2A3 272 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 GDF3Q9NR23 364 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 ADAMTS1Q9UHI8 967 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 NCKAP1Q9Y2A7 1128 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 CEP83Q9Y592 693 aa11.12□□□□□ -0.63
TDP1-212ENST00000555565 TP53BP1Q12888 1972 aaPredicted RBP11.12□□□□□ -0.63
TDP1-212ENST00000555565 BOD1L1Q8NFC6 3051 aa11.11□□□□□ -0.63
TDP1-212ENST00000555565 FAM47DPA6NHR8 397 aa11.11□□□□□ -0.63
TDP1-212ENST00000555565 I6L893 689 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms