RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 ADAMTS18Q8TE60 1221 aa5.84□□□□□ -1.47
VRK1-205ENST00000555402 SH3KBP1Q96B97 665 aa5.84□□□□□ -1.47
VRK1-205ENST00000555402 ZNF845Q96IR2 970 aaPredicted RBP5.84□□□□□ -1.47
VRK1-205ENST00000555402 C7orf26Q96N11 449 aa5.84□□□□□ -1.47
VRK1-205ENST00000555402 FUZQ9BT04 418 aa5.84□□□□□ -1.47
VRK1-205ENST00000555402 PHF7Q9BWX1 381 aaPredicted RBP5.84□□□□□ -1.47
VRK1-205ENST00000555402 NUAK2Q9H093 628 aa5.84□□□□□ -1.47
VRK1-205ENST00000555402 INTS2Q9H0H0 1204 aaKnown RBP5.84□□□□□ -1.47
VRK1-205ENST00000555402 BLOC1S4Q9NUP1 217 aa5.84□□□□□ -1.47
VRK1-205ENST00000555402 ORC3Q9UBD5 711 aaPredicted RBP5.84□□□□□ -1.47
VRK1-205ENST00000555402 SIRT4Q9Y6E7 314 aaPredicted RBP5.84□□□□□ -1.47
VRK1-205ENST00000555402 SCINQ9Y6U3 715 aa5.84□□□□□ -1.47
VRK1-205ENST00000555402 A0A1W2PPH5 198 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 JTBO76095 146 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 CNTN5O94779 1100 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 ENO1P06733 434 aaKnown RBP5.83□□□□□ -1.48
VRK1-205ENST00000555402 PKMP14618 531 aaKnown RBP5.83□□□□□ -1.48
VRK1-205ENST00000555402 SFPQP23246 707 aaKnown RBP eCLIP5.83□□□□□ -1.48
VRK1-205ENST00000555402 AVPR2P30518 371 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 CCKARP32238 428 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 MMP13P45452 471 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 FOXD4Q12950 439 aaPredicted RBP5.83□□□□□ -1.48
VRK1-205ENST00000555402 SLC14A1Q13336 389 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 ANXA2RQ3ZCQ2 193 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 GXYLT1Q4G148 440 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 MZT2BQ6NZ67 158 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 MTFR2Q6P444 385 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 DHRS13Q6UX07 377 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 TMEM200AQ86VY9 491 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 SCN4BQ8IWT1 228 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 GALNT4Q8N4A0 578 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 LSM14AQ8ND56 463 aaKnown RBP5.83□□□□□ -1.48
VRK1-205ENST00000555402 RFWD2Q8NHY2 731 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 ADAMTS15Q8TE58 950 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 NOC3LQ8WTT2 800 aaKnown RBP5.83□□□□□ -1.48
VRK1-205ENST00000555402 RUFY2Q8WXA3 655 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 CELF1Q92879 486 aaKnown RBP5.83□□□□□ -1.48
VRK1-205ENST00000555402 GAR1Q9NY12 217 aaKnown RBP5.83□□□□□ -1.48
VRK1-205ENST00000555402 SEMA5BQ9P283 1151 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 CD207Q9UJ71 328 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 CAMK2AQ9UQM7 478 aa5.83□□□□□ -1.48
VRK1-205ENST00000555402 A0A087X0M5 115 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 A0A1B0GX30 115 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 BTBD19C9JJ37 291 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 PRR23D1E9PI22 279 aaPredicted RBP5.82□□□□□ -1.48
VRK1-205ENST00000555402 UBE2Q2LH0YL09 131 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 H7C1Q1 480 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 TUBB4AP04350 444 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 CENPBP07199 599 aaPredicted RBP5.82□□□□□ -1.48
VRK1-205ENST00000555402 LDHCP07864 332 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 PRR23D2P0DMB1 279 aaPredicted RBP5.82□□□□□ -1.48
VRK1-205ENST00000555402 ARSAP15289 507 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 HOXB9P17482 250 aaPredicted RBP5.82□□□□□ -1.48
VRK1-205ENST00000555402 ATF7P17544 494 aaPredicted RBP5.82□□□□□ -1.48
VRK1-205ENST00000555402 GPD2P43304 727 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 CCR9P51686 369 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 MVDP53602 400 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 OAZ1P54368 228 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 CDH15P55291 814 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 BYSLQ13895 437 aaKnown RBP5.82□□□□□ -1.48
VRK1-205ENST00000555402 PDE1CQ14123 709 aaPredicted RBP5.82□□□□□ -1.48
VRK1-205ENST00000555402 SEC23BQ15437 767 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 AWAT1Q58HT5 328 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 SH2D4BQ5SQS7 431 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 GPATCH4Q5T3I0 446 aaKnown RBP5.82□□□□□ -1.48
VRK1-205ENST00000555402 RANBP10Q6VN20 620 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 ZCCHC10Q8TBK6 192 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 NCSTNQ92542 709 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 KIF1BPQ96EK5 621 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 TTYH1Q9H313 450 aaPredicted RBP5.82□□□□□ -1.48
VRK1-205ENST00000555402 PLEKHA5Q9HAU0 1116 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 KRT84Q9NSB2 600 aa5.82□□□□□ -1.48
VRK1-205ENST00000555402 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.82□□□□□ -1.48
VRK1-205ENST00000555402 TUBA8Q9NY65 449 aaPredicted RBP5.82□□□□□ -1.48
VRK1-205ENST00000555402 TCRBV5S1A1TA0A578 114 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 DYTNA2CJ06 578 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 C16orf96A6NNT2 1141 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 PRSS47A8MTI9 375 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 SMIM22K7EJ46 135 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 DDX58O95786 925 aaKnown RBP5.81□□□□□ -1.48
VRK1-205ENST00000555402 RFPL3SP0C7P2 107 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 NHLRC4P0CG21 123 aaPredicted RBP5.81□□□□□ -1.48
VRK1-205ENST00000555402 TGM2P21980 687 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 HNF1BP35680 557 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 ZNF84P51523 738 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 DMWDQ09019 674 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 AP5B1Q2VPB7 878 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 MIDNQ504T8 468 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 ITPRIPL1Q6GPH6 555 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 ATF7IPQ6VMQ6 1270 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 RNF144BQ7Z419 303 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 BRSK2Q8IWQ3 736 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 TNIP2Q8NFZ5 429 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 CENPIQ92674 756 aaPredicted RBP5.81□□□□□ -1.48
VRK1-205ENST00000555402 ADAD1Q96M93 576 aaKnown RBP5.81□□□□□ -1.48
VRK1-205ENST00000555402 EYA3Q99504 573 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 MPHOSPH8Q99549 860 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 BARD1Q99728 777 aaKnown RBP5.81□□□□□ -1.48
VRK1-205ENST00000555402 TMEM79Q9BSE2 394 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 NPLQ9BXD5 320 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms