RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 ETF1P62495 437 aaKnown RBP12.97□□□□□ -0.33
SYNE2-219ENST00000555323 ARF5P84085 180 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 ECT2LQ008S8 904 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 GALNT2Q10471 571 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 KLF1Q13351 362 aaPredicted RBP12.97□□□□□ -0.33
SYNE2-219ENST00000555323 PAPD7Q5XG87 772 aaKnown RBP12.97□□□□□ -0.33
SYNE2-219ENST00000555323 IL31Q6EBC2 164 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 RETSATQ6NUM9 610 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 AADACL2Q6P093 401 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 NYAP1Q6ZVC0 841 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 BZW1Q7L1Q6 419 aaKnown RBP12.97□□□□□ -0.33
SYNE2-219ENST00000555323 RFX6Q8HWS3 928 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 CCDC50Q8IVM0 306 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 TP53INP2Q8IXH6 220 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 C17orf53Q8N3J3 647 aaPredicted RBP12.97□□□□□ -0.33
SYNE2-219ENST00000555323 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.97□□□□□ -0.33
SYNE2-219ENST00000555323 CELF6Q96J87 481 aaKnown RBP12.97□□□□□ -0.33
SYNE2-219ENST00000555323 TSGA13Q96PP4 275 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 WDR24Q96S15 920 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 HERPUD2Q9BSE4 406 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 IER2Q9BTL4 223 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 SPON2Q9BUD6 331 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 CIPCQ9C0C6 399 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 CHRDQ9H2X0 955 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 TMEM245Q9H330 911 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 MFSD1Q9H3U5 465 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 ATP13A1Q9HD20 1204 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 RBM12Q9NTZ6 932 aaKnown RBP12.97□□□□□ -0.33
SYNE2-219ENST00000555323 DTLQ9NZJ0 730 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 PLA2G4CQ9UP65 541 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 ERVW-1Q9UQF0 538 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 HS3ST2Q9Y278 367 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 CHD5Q8TDI0 1954 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 STK25O00506 426 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 CES2O00748 559 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 KCNK3O14649 394 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 PI15O43692 258 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 ATP9BO43861 1147 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 SNAP91O60641 907 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 MAFKO60675 156 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 RNF40O75150 1001 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 ATP1A1P05023 1023 aaKnown RBP12.96□□□□□ -0.33
SYNE2-219ENST00000555323 MX2P20592 715 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 CTSOP43234 321 aaPredicted RBP12.96□□□□□ -0.33
SYNE2-219ENST00000555323 CLCN6P51797 869 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 GBE1Q04446 702 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 ZNF33AQ06730 810 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 IL10RBQ08334 325 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 ZNF211Q13398 564 aaPredicted RBP12.96□□□□□ -0.33
SYNE2-219ENST00000555323 GAS6Q14393 721 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 INO80DQ53TQ3 878 aaPredicted RBP12.96□□□□□ -0.33
SYNE2-219ENST00000555323 EGFLAMQ63HQ2 1017 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 KAZNQ674X7 775 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 TRMT11Q7Z4G4 463 aaKnown RBP12.96□□□□□ -0.33
SYNE2-219ENST00000555323 RASGEF1CQ8N431 466 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 ZNF513Q8N8E2 541 aaPredicted RBP12.96□□□□□ -0.33
SYNE2-219ENST00000555323 IL17RCQ8NAC3 791 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 SORCS1Q8WY21 1168 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 FATE1Q969F0 183 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 PBXIP1Q96AQ6 731 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 PBKQ96KB5 322 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 OLFM3Q96PB7 478 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 BRD8Q9H0E9 1235 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 PDFQ9HBH1 243 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 IPO11Q9UI26 975 aaKnown RBP12.96□□□□□ -0.33
SYNE2-219ENST00000555323 VPS51Q9UID3 782 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 TTC7AQ9ULT0 858 aaPredicted RBP12.96□□□□□ -0.33
SYNE2-219ENST00000555323 HPCAL4Q9UM19 191 aa12.96□□□□□ -0.33
SYNE2-219ENST00000555323 TRIOO75962 3097 aa12.96□□□□□ -0.34
SYNE2-219ENST00000555323 APOC4-APOC2K7ER74 178 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 CBX4O00257 560 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 FANCGO15287 622 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 MFSD11O43934 449 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 PRAMEF11O60813 436 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 GPR37L1O60883 481 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 ATG13O75143 517 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 PEX11BO96011 259 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 MT-CO1P00395 513 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 APOC2P02655 101 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 TUBB4AP04350 444 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 C7P10643 843 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 GLDCP23378 1020 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 CCNCP24863 283 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 NTSR1P30989 418 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 TIE1P35590 1138 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 NNMTP40261 264 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 GARSP41250 739 aaKnown RBP12.95□□□□□ -0.34
SYNE2-219ENST00000555323 DNA2P51530 1060 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 GEMIN4P57678 1058 aaKnown RBP12.95□□□□□ -0.34
SYNE2-219ENST00000555323 ZNF234Q14588 700 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 LLGL1Q15334 1064 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 C2orf27AQ580R0 203 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 METTL3Q86U44 580 aaKnown RBP12.95□□□□□ -0.34
SYNE2-219ENST00000555323 SLC13A5Q86YT5 568 aaPredicted RBP12.95□□□□□ -0.34
SYNE2-219ENST00000555323 PLPP6Q8IY26 295 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 SH2D3CQ8N5H7 860 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 FLCNQ8NFG4 579 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 CYB5D2Q8WUJ1 264 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 CASKIN2Q8WXE0 1202 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 P3H4Q92791 437 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms