RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 PGBD3Q8N328 593 aa24.79■■□□□ 1.56
SDR39U1-209ENST00000554947 CCDC112Q8NEF3 446 aa24.79■■□□□ 1.56
SDR39U1-209ENST00000554947 FRS2Q8WU20 508 aa24.79■■□□□ 1.56
SDR39U1-209ENST00000554947 SPON2Q9BUD6 331 aa24.79■■□□□ 1.56
SDR39U1-209ENST00000554947 PRDM16Q9HAZ2 1276 aa24.79■■□□□ 1.56
SDR39U1-209ENST00000554947 HPCAL4Q9UM19 191 aa24.79■■□□□ 1.56
SDR39U1-209ENST00000554947 REXO2Q9Y3B8 237 aaKnown RBP24.79■■□□□ 1.56
SDR39U1-209ENST00000554947 ZSCAN5CA6NGD5 496 aaPredicted RBP24.78■■□□□ 1.56
SDR39U1-209ENST00000554947 TTC34A8MYJ7 566 aa24.78■■□□□ 1.56
SDR39U1-209ENST00000554947 PJA2O43164 708 aa24.78■■□□□ 1.56
SDR39U1-209ENST00000554947 SNAP91O60641 907 aa24.78■■□□□ 1.56
SDR39U1-209ENST00000554947 VAV2P52735 878 aa24.78■■□□□ 1.56
SDR39U1-209ENST00000554947 PDK2Q15119 407 aa24.78■■□□□ 1.56
SDR39U1-209ENST00000554947 C9orf64Q5T6V5 341 aa24.78■■□□□ 1.56
SDR39U1-209ENST00000554947 LRRC38Q5VT99 294 aa24.78■■□□□ 1.56
SDR39U1-209ENST00000554947 IL31Q6EBC2 164 aa24.78■■□□□ 1.56
SDR39U1-209ENST00000554947 TMPRSS6Q8IU80 811 aa24.78■■□□□ 1.56
SDR39U1-209ENST00000554947 LZTR1Q8N653 840 aa24.78■■□□□ 1.56
SDR39U1-209ENST00000554947 ZNF366Q8N895 744 aa24.78■■□□□ 1.56
SDR39U1-209ENST00000554947 TSC1Q92574 1164 aa24.78■■□□□ 1.56
SDR39U1-209ENST00000554947 TPSD1Q9BZJ3 242 aa24.78■■□□□ 1.56
SDR39U1-209ENST00000554947 MKRN2Q9H000 416 aaKnown RBP24.78■■□□□ 1.56
SDR39U1-209ENST00000554947 NOL6Q9H6R4 1146 aaKnown RBP24.78■■□□□ 1.56
SDR39U1-209ENST00000554947 PCDH18Q9HCL0 1135 aa24.78■■□□□ 1.56
SDR39U1-209ENST00000554947 VPS13AQ96RL7 3174 aa24.78■■□□□ 1.56
SDR39U1-209ENST00000554947 CEP192Q8TEP8 1941 aa24.77■■□□□ 1.56
SDR39U1-209ENST00000554947 THADAQ6YHU6 1953 aa24.77■■□□□ 1.56
SDR39U1-209ENST00000554947 CBX4O00257 560 aa24.77■■□□□ 1.56
SDR39U1-209ENST00000554947 SRCP12931 536 aa24.77■■□□□ 1.56
SDR39U1-209ENST00000554947 ERCC2P18074 760 aa24.77■■□□□ 1.56
SDR39U1-209ENST00000554947 P2RY2P41231 377 aa24.77■■□□□ 1.56
SDR39U1-209ENST00000554947 NOP2P46087 812 aaKnown RBP24.77■■□□□ 1.56
SDR39U1-209ENST00000554947 ARSEP51690 589 aa24.77■■□□□ 1.56
SDR39U1-209ENST00000554947 TAS2R40P59535 323 aa24.77■■□□□ 1.56
SDR39U1-209ENST00000554947 ZBTB16Q05516 673 aa24.77■■□□□ 1.56
SDR39U1-209ENST00000554947 MAP7D3Q8IWC1 876 aa24.77■■□□□ 1.56
SDR39U1-209ENST00000554947 PTPRN2Q92932 1015 aa24.77■■□□□ 1.56
SDR39U1-209ENST00000554947 NKD2Q969F2 451 aaPredicted RBP24.77■■□□□ 1.56
SDR39U1-209ENST00000554947 SIPA1Q96FS4 1042 aa24.77■■□□□ 1.56
SDR39U1-209ENST00000554947 SPACA7Q96KW9 195 aa24.77■■□□□ 1.56
SDR39U1-209ENST00000554947 LRRC19Q9H756 370 aa24.77■■□□□ 1.56
SDR39U1-209ENST00000554947 ABCA7Q8IZY2 2146 aa24.77■■□□□ 1.56
SDR39U1-209ENST00000554947 TMEM110-MUSTN1A8MSY1 372 aa24.76■■□□□ 1.55
SDR39U1-209ENST00000554947 KDELR3O43731 214 aa24.76■■□□□ 1.55
SDR39U1-209ENST00000554947 SIN3BO75182 1162 aa24.76■■□□□ 1.55
SDR39U1-209ENST00000554947 ACVRL1P37023 503 aa24.76■■□□□ 1.55
SDR39U1-209ENST00000554947 PLA2G5P39877 138 aa24.76■■□□□ 1.55
SDR39U1-209ENST00000554947 CDH6P55285 790 aa24.76■■□□□ 1.55
SDR39U1-209ENST00000554947 ARF5P84085 180 aa24.76■■□□□ 1.55
SDR39U1-209ENST00000554947 KRT81Q14533 505 aa24.76■■□□□ 1.55
SDR39U1-209ENST00000554947 DLG2Q15700 870 aa24.76■■□□□ 1.55
SDR39U1-209ENST00000554947 AFMIDQ63HM1 303 aa24.76■■□□□ 1.55
SDR39U1-209ENST00000554947 CPNE8Q86YQ8 564 aa24.76■■□□□ 1.55
SDR39U1-209ENST00000554947 ATP11CQ8NB49 1132 aa24.76■■□□□ 1.55
SDR39U1-209ENST00000554947 ACRBPQ8NEB7 543 aa24.76■■□□□ 1.55
SDR39U1-209ENST00000554947 PRCCQ92733 491 aaPredicted RBP24.76■■□□□ 1.55
SDR39U1-209ENST00000554947 FAM122AQ96E09 287 aa24.76■■□□□ 1.55
SDR39U1-209ENST00000554947 CSPG4P5Q96PW8 444 aa24.76■■□□□ 1.55
SDR39U1-209ENST00000554947 CEP44Q9C0F1 390 aa24.76■■□□□ 1.55
SDR39U1-209ENST00000554947 RSPH9Q9H1X1 276 aaPredicted RBP24.76■■□□□ 1.55
SDR39U1-209ENST00000554947 RASA4BC9J798 803 aa24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 RASA4O43374 803 aa24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 RNASEH1O60930 286 aaKnown RBP24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 MT-CO1P00395 513 aa24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 LMNAP02545 664 aaKnown RBP24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 GLDCP23378 1020 aa24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 MRE11P49959 708 aa24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 SERPINH1P50454 418 aaKnown RBP24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 SERINC3Q13530 473 aa24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 SIM2Q14190 667 aaPredicted RBP24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 ELAVL3Q14576 367 aaKnown RBP24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 MAP7D1Q3KQU3 841 aa24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 ZNF776Q68DI1 518 aaPredicted RBP24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 C11orf63Q6NUN7 778 aa24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 CEP68Q76N32 757 aa24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 VSIG1Q86XK7 387 aa24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 SUMF1Q8NBK3 374 aa24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 CASKIN2Q8WXE0 1202 aa24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 ZC3H10Q96K80 434 aaKnown RBP24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 ZNF670Q9BS34 389 aa24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 KLC2Q9H0B6 622 aa24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 ITM2CQ9NQX7 267 aa24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 USP36Q9P275 1121 aaKnown RBP24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 SCML1Q9UN30 329 aa24.75■■□□□ 1.55
SDR39U1-209ENST00000554947 RCCD1A6NED2 376 aa24.74■■□□□ 1.55
SDR39U1-209ENST00000554947 ARHGAP42A6NI28 874 aa24.74■■□□□ 1.55
SDR39U1-209ENST00000554947 ZNF487B1APH4 448 aa24.74■■□□□ 1.55
SDR39U1-209ENST00000554947 DCLK1O15075 740 aa24.74■■□□□ 1.55
SDR39U1-209ENST00000554947 ALOX15BO15296 676 aa24.74■■□□□ 1.55
SDR39U1-209ENST00000554947 ARHGAP6O43182 974 aa24.74■■□□□ 1.55
SDR39U1-209ENST00000554947 BUB1BO60566 1050 aaPredicted RBP24.74■■□□□ 1.55
SDR39U1-209ENST00000554947 IGLV3-19P01714 112 aa24.74■■□□□ 1.55
SDR39U1-209ENST00000554947 NUMBP49757 651 aa24.74■■□□□ 1.55
SDR39U1-209ENST00000554947 ACCSLQ4AC99 568 aa24.74■■□□□ 1.55
SDR39U1-209ENST00000554947 KIAA1324Q6UXG2 1013 aaKnown RBP24.74■■□□□ 1.55
SDR39U1-209ENST00000554947 KIAA1328Q86T90 577 aa24.74■■□□□ 1.55
SDR39U1-209ENST00000554947 KCTD6Q8NC69 237 aa24.74■■□□□ 1.55
SDR39U1-209ENST00000554947 ISG20Q96AZ6 181 aaKnown RBP24.74■■□□□ 1.55
SDR39U1-209ENST00000554947 CCDC114Q96M63 670 aa24.74■■□□□ 1.55
SDR39U1-209ENST00000554947 PHOX2BQ99453 314 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms