RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 ZNF180Q9UJW8 692 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 LOXHD1Q8IVV2 1947 aa12.08□□□□□ -0.47
XRCC3-208ENST00000554811 CYP2B6P20813 491 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 BDNFP23560 247 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 ARRB2P32121 409 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 SOX4Q06945 474 aaPredicted RBP12.08□□□□□ -0.48
XRCC3-208ENST00000554811 DPYSL2Q16555 572 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 ANKRD20A4Q4UJ75 823 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 C6orf52Q5T4I8 152 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 GK5Q6ZS86 529 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 KHSRPQ92945 711 aaKnown RBP eCLIP12.08□□□□□ -0.48
XRCC3-208ENST00000554811 OR12D3Q9UGF7 316 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 SNX13Q9Y5W8 968 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 SOCS7O14512 581 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 MAGEC1O60732 1142 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 CRCPO75575 148 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 SNUPNO95149 360 aaKnown RBP12.08□□□□□ -0.48
XRCC3-208ENST00000554811 ITGAXP20702 1163 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 GRK2P25098 689 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 SLC26A2P50443 739 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 PDAP1Q13442 181 aaKnown RBP12.08□□□□□ -0.48
XRCC3-208ENST00000554811 CYLC2Q14093 348 aaPredicted RBP12.08□□□□□ -0.48
XRCC3-208ENST00000554811 RPS6KA2Q15349 733 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 BNC2Q6ZN30 1099 aaPredicted RBP12.08□□□□□ -0.48
XRCC3-208ENST00000554811 AMIGO2Q86SJ2 522 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 TMEM110Q86TL2 294 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 PPP2R3CQ969Q6 453 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 SLC4A5Q9BY07 1137 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 CPA4Q9UI42 421 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 CDYLQ9Y232 598 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 MYBPHLA2RUH7 354 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 B3GAT3O94766 335 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 PTPN1P18031 435 aaKnown RBP12.08□□□□□ -0.48
XRCC3-208ENST00000554811 XRCC1P18887 633 aaPredicted RBP12.08□□□□□ -0.48
XRCC3-208ENST00000554811 PIK3R1P27986 724 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 NR2C2P49116 596 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 AFF1P51825 1210 aaKnown RBP12.08□□□□□ -0.48
XRCC3-208ENST00000554811 FOLH1Q04609 750 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 PDK3Q15120 406 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 KRT80Q6KB66 452 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 ARHGAP36Q6ZRI8 547 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 TRIM67Q6ZTA4 783 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 ARCQ7LC44 396 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 SERPINI1Q99574 410 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 CAAP1Q9H8G2 361 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 MTMR10Q9NXD2 777 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 MPP6Q9NZW5 540 aa12.08□□□□□ -0.48
XRCC3-208ENST00000554811 RBBP6Q7Z6E9 1792 aaKnown RBP12.07□□□□□ -0.48
XRCC3-208ENST00000554811 IGKV6-21A0A0C4DH24 114 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 CAPN14A8MX76 684 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.07□□□□□ -0.48
XRCC3-208ENST00000554811 TREHO43280 583 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 ALDH1A3P47895 512 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 SEMA5AQ13591 1074 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 DBN1Q16643 649 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 AGKQ53H12 422 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 LRRC8BQ6P9F7 803 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 SLC26A9Q7LBE3 791 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 MAVSQ7Z434 540 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 OSTM1Q86WC4 334 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 WNT8BQ93098 351 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 NXNL1Q96CM4 212 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 EPAS1Q99814 870 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 SLC39A3Q9BRY0 314 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 PCDHAC1Q9H158 963 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 SFMBT1Q9UHJ3 866 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 TLL2Q9Y6L7 1015 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 COL11A1P12107 1806 aaPredicted RBP12.07□□□□□ -0.48
XRCC3-208ENST00000554811 BRWD3Q6RI45 1802 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 KIF3CO14782 793 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 XPOTO43592 962 aaKnown RBP12.07□□□□□ -0.48
XRCC3-208ENST00000554811 FKBP6O75344 327 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 JUNP05412 331 aaKnown RBP12.07□□□□□ -0.48
XRCC3-208ENST00000554811 NPR3P17342 541 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 VCLP18206 1134 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 TPSB2P20231 275 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 PTPN3P26045 913 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 THOP1P52888 689 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 CDH13P55290 713 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 ENPEPQ07075 957 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 TPSAB1Q15661 275 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 LSM12Q3MHD2 195 aaKnown RBP12.07□□□□□ -0.48
XRCC3-208ENST00000554811 RARS2Q5T160 578 aaKnown RBP12.07□□□□□ -0.48
XRCC3-208ENST00000554811 ARHGAP17Q68EM7 881 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 PSTKQ8IV42 348 aaKnown RBP12.07□□□□□ -0.48
XRCC3-208ENST00000554811 ATPAF2Q8N5M1 289 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 TRIML2Q8N7C3 387 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 KYQ8NBH2 561 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 VPS33BQ9H267 617 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 MMADHCQ9H3L0 296 aaPredicted RBP12.07□□□□□ -0.48
XRCC3-208ENST00000554811 TLE6Q9H808 572 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 IRAK4Q9NWZ3 460 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 PDP2Q9P2J9 529 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 CRYL1Q9Y2S2 319 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 POLR2AP24928 1970 aaKnown RBP12.07□□□□□ -0.48
XRCC3-208ENST00000554811 BIRC5O15392 142 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 TSHRP16473 764 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 EDNRBP24530 442 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 MAPK10P53779 464 aa12.07□□□□□ -0.48
XRCC3-208ENST00000554811 ZBTB17Q13105 803 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms