RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 MPHOSPH8Q99549 860 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 NPAS1Q99742 590 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 HTATIP2Q9BUP3 242 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 PHF7Q9BWX1 381 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-213ENST00000554776 TRIM2Q9C040 744 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 MROH8Q9H579 483 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 MOV10Q9HCE1 1003 aaKnown RBP3.42□□□□□ -1.86
SCFD1-213ENST00000554776 TMEM184CQ9NVA4 438 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 THAP1Q9NVV9 213 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 KLQ9UEF7 1012 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 CNPY2Q9Y2B0 182 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 ZMYM2Q9UBW7 1377 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 A0A1W2PPH5 198 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 DYTNA2CJ06 578 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 NPIPB13A6NJU9 1138 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 NPIPB5A8MRT5 1133 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 NPIPB4C9JG80 1138 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 HNRNPRO43390 633 aaKnown RBP3.41□□□□□ -1.86
SCFD1-213ENST00000554776 CD63P08962 238 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 ALDOCP09972 364 aaKnown RBP3.41□□□□□ -1.86
SCFD1-213ENST00000554776 AKR1A1P14550 325 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 TFEBP19484 476 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 CAPN3P20807 821 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 PRPH2P23942 346 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 PRKCHP24723 683 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 RXRGP48443 463 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 VAMP2P63027 116 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 B4GALNT1Q00973 533 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 LAMB3Q13751 1172 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 KRT32Q14532 448 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 PGM5Q15124 567 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 RBMS2Q15434 407 aaKnown RBP3.41□□□□□ -1.86
SCFD1-213ENST00000554776 GPR68Q15743 365 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 TSTQ16762 297 aaKnown RBP3.41□□□□□ -1.86
SCFD1-213ENST00000554776 RUNDC3AQ59EK9 446 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 FAM69AQ5T7M9 428 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 HAUS3Q68CZ6 603 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 MDGA2Q7Z553 956 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 MRPL10Q7Z7H8 261 aaKnown RBP3.41□□□□□ -1.86
SCFD1-213ENST00000554776 GLCCI1Q86VQ1 547 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 UEVLDQ8IX04 471 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 PAQR4Q8N4S7 273 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-213ENST00000554776 ADPRHL1Q8NDY3 354 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 MASTLQ96GX5 879 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 APOPT1Q96IL0 206 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 PPP1R10Q96QC0 940 aaKnown RBP3.41□□□□□ -1.86
SCFD1-213ENST00000554776 BARD1Q99728 777 aaKnown RBP3.41□□□□□ -1.86
SCFD1-213ENST00000554776 ABHD14AQ9BUJ0 271 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 USP44Q9H0E7 712 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 UNC45AQ9H3U1 944 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 SFXN1Q9H9B4 322 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 JMJD4Q9H9V9 463 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 TXNRD2Q9NNW7 524 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 BLOC1S4Q9NUP1 217 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.41□□□□□ -1.86
SCFD1-213ENST00000554776 TBX20Q9UMR3 447 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 CAMK2AQ9UQM7 478 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 TMEM98Q9Y2Y6 226 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 CYP46A1Q9Y6A2 500 aa3.41□□□□□ -1.86
SCFD1-213ENST00000554776 LY6G6EA0A0G2JKS1 128 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 SH2D7A6NKC9 451 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-213ENST00000554776 SAC3D1A6NKF1 404 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 HMGB1P1B2RPK0 211 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-213ENST00000554776 SOCS2O14508 198 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 SYN3O14994 580 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 TSPAN3O60637 253 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 USP12O75317 370 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 RTN3O95197 1032 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-213ENST00000554776 PRF1P14222 555 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 ARSAP15289 507 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 MCM2P49736 904 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 PLCD1P51178 756 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 SLC12A2P55011 1212 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 RPP30P78346 268 aaKnown RBP3.4□□□□□ -1.87
SCFD1-213ENST00000554776 STIM1Q13586 685 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 THOC5Q13769 683 aaKnown RBP3.4□□□□□ -1.87
SCFD1-213ENST00000554776 TWIST1Q15672 202 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 AP5B1Q2VPB7 878 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 SLC45A4Q5BKX6 768 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 ARL13AQ5H913 290 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-213ENST00000554776 KIAA1755Q5JYT7 1200 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 HYIQ5T013 277 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 LIPMQ5VYY2 423 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 NAPEPLDQ6IQ20 393 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 MTFR2Q6P444 385 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 RINLQ6ZS11 566 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 R3HCC1LQ7Z5L2 792 aaKnown RBP3.4□□□□□ -1.87
SCFD1-213ENST00000554776 ANKRD13BQ86YJ7 626 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 TSPYL6Q8N831 410 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 ARL14EPQ8N8R7 260 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-213ENST00000554776 NRACQ8N912 160 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 USP38Q8NB14 1042 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 C2CD4CQ8TF44 421 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 RUFY2Q8WXA3 655 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 ELP4Q96EB1 424 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 HMCESQ96FZ2 354 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 LBHD1Q9BQE6 289 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-213ENST00000554776 PIMREGQ9BSJ6 248 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 SCNM1Q9BWG6 230 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 TRIM31Q9BZY9 425 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms