RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 MAPRE3Q9UPY8 281 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 SSX2IPQ9Y2D8 614 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 CACNA1HO95180 2353 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 SCN1AP35498 2009 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 CLUHO75153 1309 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 TTC26A0AVF1 554 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 FRMD3A2A2Y4 597 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 TMEM221A6NGB7 291 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 MYMKA6NI61 221 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 TISP43B9A030 160 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 H0YCG3 227 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 I3L4J1 428 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 M0R296 226 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 TBC1D4O60343 1298 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 NRP2O60462 931 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 PPP6R2O75170 966 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 TBCAO75347 108 aaKnown RBP4.49□□□□□ -1.69
VTI1B-203ENST00000554636 B3GAT3O94766 335 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 IPO13O94829 963 aaKnown RBP4.49□□□□□ -1.69
VTI1B-203ENST00000554636 SEC24DO94855 1032 aaPredicted RBP4.49□□□□□ -1.69
VTI1B-203ENST00000554636 ADRB2P07550 413 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 ADH4P08319 380 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 CLTAP09496 248 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 CXCL8P10145 99 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 MYBP10242 640 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 NMT1P30419 496 aaKnown RBP4.49□□□□□ -1.69
VTI1B-203ENST00000554636 LRPAP1P30533 357 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 DDIT3P35638 169 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 TNFSF9P41273 254 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 BRCC3P46736 316 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 LIG4P49917 911 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 LGALS4P56470 323 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 NRG3P56975 720 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 SLC25A3Q00325 362 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 GTF2BQ00403 316 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 DUSP2Q05923 314 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 ELAVL2Q12926 359 aaKnown RBP4.49□□□□□ -1.69
VTI1B-203ENST00000554636 PKP1Q13835 747 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 DHX8Q14562 1220 aaKnown RBP4.49□□□□□ -1.69
VTI1B-203ENST00000554636 SLC39A14Q15043 492 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 ZBTB6Q15916 424 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 PSMD5Q16401 504 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 PITRM1Q5JRX3 1037 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 ATAT1Q5SQI0 421 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 RRAGBQ5VZM2 374 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 DCLRE1AQ6PJP8 1040 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 CYP26C1Q6V0L0 522 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 ZNF662Q6ZS27 426 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 CCDC149Q6ZUS6 474 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 SFR1Q86XK3 245 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 CEP57Q86XR8 500 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 XYLT1Q86Y38 959 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 PALB2Q86YC2 1186 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 MYCT1Q8N699 235 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 TDRD5Q8NAT2 981 aaKnown RBP4.49□□□□□ -1.69
VTI1B-203ENST00000554636 CLRN3Q8NCR9 226 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 RASSF8Q8NHQ8 419 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 HDAC7Q8WUI4 952 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 ST8SIA2Q92186 375 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 C18orf25Q96B23 403 aaPredicted RBP4.49□□□□□ -1.69
VTI1B-203ENST00000554636 MNTQ99583 582 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 TTC1Q99614 292 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 CLSTN3Q9BQT9 956 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 CPPED1Q9BRF8 314 aaPredicted RBP4.49□□□□□ -1.69
VTI1B-203ENST00000554636 TTPALQ9BTX7 342 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 STRA6Q9BX79 667 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 FGFBP2Q9BYJ0 223 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 IKZF4Q9H2S9 585 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 KCTD10Q9H3F6 313 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 SMOC2Q9H3U7 446 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 ST6GALNAC4Q9H4F1 302 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 WDR6Q9NNW5 1121 aaKnown RBP4.49□□□□□ -1.69
VTI1B-203ENST00000554636 TOPORSQ9NS56 1045 aaPredicted RBP4.49□□□□□ -1.69
VTI1B-203ENST00000554636 SLC38A7Q9NVC3 462 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 ZDHHC7Q9NXF8 308 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 LARSQ9P2J5 1176 aaKnown RBP4.49□□□□□ -1.69
VTI1B-203ENST00000554636 PRSS50Q9UI38 385 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 KCNG1Q9UIX4 513 aa4.49□□□□□ -1.69
VTI1B-203ENST00000554636 TCHHQ07283 1943 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 A0A0B4J269 797 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 CCDC195A0A1B0GUA6 201 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 TLDC2A0PJX2 215 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 LACTBL1A8MY62 500 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 ANKRD63C9JTQ0 380 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 PPEF2O14830 753 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 HNRNPDLO14979 420 aaKnown RBP4.48□□□□□ -1.69
VTI1B-203ENST00000554636 SYN3O14994 580 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 SPTLC2O15270 562 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 OGTO15294 1046 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 CLDN3O15551 220 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 MTSS1O43312 755 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 N4BP1O75113 896 aaKnown RBP4.48□□□□□ -1.69
VTI1B-203ENST00000554636 YEATS4O95619 227 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 KRT18P05783 430 aaKnown RBP4.48□□□□□ -1.69
VTI1B-203ENST00000554636 POU2F2P09086 479 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 SPATA31D3P0C874 917 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 BPIP17213 487 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 GAP43P17677 238 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 SCP2P22307 547 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 HOXA9P31269 272 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms