RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 LCTP09848 1927 aa6.15□□□□□ -1.43
VPS33B-203ENST00000554264 PTPRSQ13332 1948 aa6.15□□□□□ -1.43
VPS33B-203ENST00000554264 TET1Q8NFU7 2136 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 TMEM221A6NGB7 291 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 TCP11X1B4DZS4 312 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 NPIPB6E9PJ23 425 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 C5orf67F2Z3F1 127 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 H7BY64 318 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 M0R296 226 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 HAS3O00219 553 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 IPO5O00410 1097 aaKnown RBP6.14□□□□□ -1.43
VPS33B-203ENST00000554264 DKC1O60832 514 aaKnown RBP eCLIP6.14□□□□□ -1.43
VPS33B-203ENST00000554264 PSMD10O75832 226 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 IL1BP01584 269 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 SHBGP04278 402 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 RB1P06400 928 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 ASGR2P07307 311 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 TROVE2P10155 538 aaKnown RBP eCLIP6.14□□□□□ -1.43
VPS33B-203ENST00000554264 CALB2P22676 271 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 IGFBP6P24592 240 aaPredicted RBP6.14□□□□□ -1.43
VPS33B-203ENST00000554264 PHBP35232 272 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 THPOP40225 353 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 MC3RP41968 323 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 POLGP54098 1239 aaPredicted RBP6.14□□□□□ -1.43
VPS33B-203ENST00000554264 GCNT1Q02742 428 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 KRT17Q04695 432 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 MCL1Q07820 350 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 TMEM62Q0P6H9 643 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 E2F5Q15329 346 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 PLEKHG4Q58EX7 1191 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 SLC45A4Q5BKX6 768 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 LIN9Q5TKA1 542 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 KRT39Q6A163 491 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 ACAD10Q6JQN1 1059 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 SEPT14Q6ZU15 432 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 BZW1Q7L1Q6 419 aaKnown RBP6.14□□□□□ -1.43
VPS33B-203ENST00000554264 ANKS1BQ7Z6G8 1248 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 TBC1D1Q86TI0 1168 aaPredicted RBP6.14□□□□□ -1.43
VPS33B-203ENST00000554264 SERINC5Q86VE9 423 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 VSIG1Q86XK7 387 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.14□□□□□ -1.43
VPS33B-203ENST00000554264 ZCCHC9Q8N567 271 aaKnown RBP6.14□□□□□ -1.43
VPS33B-203ENST00000554264 RDM1Q8NG50 284 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 PPTC7Q8NI37 304 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 LMO3Q8TAP4 145 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 MDM1Q8TC05 714 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 SHC3Q92529 594 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 GLG1Q92896 1179 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 PPP2R3CQ969Q6 453 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 ZBTB9Q96C00 473 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 PEX11GQ96HA9 241 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 LRRC37BQ96QE4 947 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 NUP85Q9BW27 656 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 TEKT3Q9BXF9 490 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 PITPNM3Q9BZ71 974 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 MMADHCQ9H3L0 296 aaPredicted RBP6.14□□□□□ -1.43
VPS33B-203ENST00000554264 DCLRE1BQ9H816 532 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 RNPEPL1Q9HAU8 725 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 KIAA1586Q9HCI6 787 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 TMEM8AQ9HCN3 771 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 ASIC3Q9UHC3 531 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 CD207Q9UJ71 328 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 ANAPC5Q9UJX4 755 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 NOCTQ9UK39 431 aaKnown RBP6.14□□□□□ -1.43
VPS33B-203ENST00000554264 COQ4Q9Y3A0 265 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 MRPL11Q9Y3B7 192 aaKnown RBP6.14□□□□□ -1.43
VPS33B-203ENST00000554264 LRRC42Q9Y546 428 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.14□□□□□ -1.43
VPS33B-203ENST00000554264 SCINQ9Y6U3 715 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 NFASCO94856 1347 aa6.14□□□□□ -1.43
VPS33B-203ENST00000554264 IGLV3-22A0A075B6J6 115 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 K7ENM7 598 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 FOXN3O00409 490 aaPredicted RBP6.13□□□□□ -1.43
VPS33B-203ENST00000554264 TM9SF1O15321 606 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 AHCYL1O43865 530 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 GAS7O60861 476 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 ATP2C2O75185 946 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 FESP07332 822 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 POLR2MP0CAP2 368 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 ZNF286BP0CG31 522 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 ACADSP16219 412 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 ATP6V1C1P21283 382 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 CFPP27918 469 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 PMLP29590 882 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 CTNNB1P35222 781 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 PTPN7P35236 360 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 CASP4P49662 377 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 GPC3P51654 580 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 CLCN2P51788 898 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 GPR85P60893 370 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 SUMO1P63165 101 aaKnown RBP6.13□□□□□ -1.43
VPS33B-203ENST00000554264 IFI35P80217 286 aaPredicted RBP6.13□□□□□ -1.43
VPS33B-203ENST00000554264 GTF2BQ00403 316 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 CDK18Q07002 472 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 HYAL1Q12794 435 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 TCF15Q12870 199 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 GRIK3Q13003 919 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 MESDQ14696 234 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 MORF4L2Q15014 288 aa6.13□□□□□ -1.43
VPS33B-203ENST00000554264 RBBP5Q15291 538 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms