RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 CDKN3Q16667 212 aa17.46■□□□□ 0.39
NEK9-204ENST00000554258 ZACNQ401N2 412 aa17.46■□□□□ 0.39
NEK9-204ENST00000554258 MBLAC2Q68D91 279 aa17.46■□□□□ 0.39
NEK9-204ENST00000554258 APTXQ7Z2E3 356 aaKnown RBP17.46■□□□□ 0.39
NEK9-204ENST00000554258 EFL1Q7Z2Z2 1120 aaKnown RBP17.46■□□□□ 0.39
NEK9-204ENST00000554258 AHI1Q8N157 1196 aa17.46■□□□□ 0.39
NEK9-204ENST00000554258 ZMIZ2Q8NF64 920 aa17.46■□□□□ 0.39
NEK9-204ENST00000554258 KLHDC7BQ96G42 594 aa17.46■□□□□ 0.39
NEK9-204ENST00000554258 SMOQ99835 787 aa17.46■□□□□ 0.39
NEK9-204ENST00000554258 NMUR1Q9HB89 426 aa17.46■□□□□ 0.39
NEK9-204ENST00000554258 KLHL11Q9NVR0 708 aa17.46■□□□□ 0.39
NEK9-204ENST00000554258 LIMA1Q9UHB6 759 aaKnown RBP17.46■□□□□ 0.39
NEK9-204ENST00000554258 ADGRG4Q8IZF6 3080 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 K7ESM1 405 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 PLD2O14939 933 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 STX10O60499 249 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 TRIM49P0CI25 452 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 TRIM49CP0CI26 452 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 GOT1P17174 413 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 HOXD9P28356 352 aaPredicted RBP17.45■□□□□ 0.38
NEK9-204ENST00000554258 POLE2P56282 527 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 WDR72Q3MJ13 1102 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 BORAQ6PGQ7 559 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 CRTC1Q6UUV9 634 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 SV2AQ7L0J3 742 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 TRAPPC11Q7Z392 1133 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 TICAM1Q8IUC6 712 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 MIB2Q96AX9 1013 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 DUSP23Q9BVJ7 150 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 ARHGAP20Q9P2F6 1191 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 RASAL2Q9UJF2 1139 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 GGA2Q9UJY4 613 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 NAGPAQ9UK23 515 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 ACSL6Q9UKU0 697 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 DMTF1Q9Y222 760 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 COQ4Q9Y3A0 265 aa17.45■□□□□ 0.38
NEK9-204ENST00000554258 SCN8AQ9UQD0 1980 aa17.44■□□□□ 0.38
NEK9-204ENST00000554258 A1L4Q6 167 aa17.44■□□□□ 0.38
NEK9-204ENST00000554258 BEST1O76090 585 aa17.44■□□□□ 0.38
NEK9-204ENST00000554258 PABPC1P11940 636 aaKnown RBP17.44■□□□□ 0.38
NEK9-204ENST00000554258 PRKCSHP14314 528 aaPredicted RBP17.44■□□□□ 0.38
NEK9-204ENST00000554258 POLR2EP19388 210 aaKnown RBP17.44■□□□□ 0.38
NEK9-204ENST00000554258 WT1P19544 449 aaPredicted RBP17.44■□□□□ 0.38
NEK9-204ENST00000554258 NUDT1P36639 197 aa17.44■□□□□ 0.38
NEK9-204ENST00000554258 MAP3K7CLP57077 242 aa17.44■□□□□ 0.38
NEK9-204ENST00000554258 KCNMA1Q12791 1236 aa17.44■□□□□ 0.38
NEK9-204ENST00000554258 MAN2A1Q16706 1144 aa17.44■□□□□ 0.38
NEK9-204ENST00000554258 POM121L1PQ3SYA9 428 aa17.44■□□□□ 0.38
NEK9-204ENST00000554258 MPPE1Q53F39 396 aa17.44■□□□□ 0.38
NEK9-204ENST00000554258 MIIPQ5JXC2 388 aa17.44■□□□□ 0.38
NEK9-204ENST00000554258 GUSBP11Q6P575 273 aa17.44■□□□□ 0.38
NEK9-204ENST00000554258 FUKQ8N0W3 1084 aa17.44■□□□□ 0.38
NEK9-204ENST00000554258 AADATQ8N5Z0 425 aa17.44■□□□□ 0.38
NEK9-204ENST00000554258 SSC4DQ8WTU2 575 aa17.44■□□□□ 0.38
NEK9-204ENST00000554258 TUBGCP2Q9BSJ2 902 aa17.44■□□□□ 0.38
NEK9-204ENST00000554258 TMEM8AQ9HCN3 771 aa17.44■□□□□ 0.38
NEK9-204ENST00000554258 TUBD1Q9UJT1 453 aa17.44■□□□□ 0.38
NEK9-204ENST00000554258 CA5BQ9Y2D0 317 aa17.44■□□□□ 0.38
NEK9-204ENST00000554258 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.44■□□□□ 0.38
NEK9-204ENST00000554258 SCAMP1O15126 338 aa17.43■□□□□ 0.38
NEK9-204ENST00000554258 P4HA2O15460 535 aa17.43■□□□□ 0.38
NEK9-204ENST00000554258 NEBLO76041 1014 aa17.43■□□□□ 0.38
NEK9-204ENST00000554258 VNN1O95497 513 aa17.43■□□□□ 0.38
NEK9-204ENST00000554258 ATP1A3P13637 1013 aa17.43■□□□□ 0.38
NEK9-204ENST00000554258 GCLMP48507 274 aa17.43■□□□□ 0.38
NEK9-204ENST00000554258 PSMD8P48556 350 aa17.43■□□□□ 0.38
NEK9-204ENST00000554258 CD97P48960 835 aa17.43■□□□□ 0.38
NEK9-204ENST00000554258 ST8SIA6P61647 398 aa17.43■□□□□ 0.38
NEK9-204ENST00000554258 KRT31Q15323 416 aa17.43■□□□□ 0.38
NEK9-204ENST00000554258 HSP90AA4PQ58FG1 418 aa17.43■□□□□ 0.38
NEK9-204ENST00000554258 FHL5Q5TD97 284 aa17.43■□□□□ 0.38
NEK9-204ENST00000554258 GPRIN1Q7Z2K8 1008 aa17.43■□□□□ 0.38
NEK9-204ENST00000554258 SRRM1Q8IYB3 904 aaKnown RBP17.43■□□□□ 0.38
NEK9-204ENST00000554258 FBXO39Q8N4B4 442 aa17.43■□□□□ 0.38
NEK9-204ENST00000554258 JAKMIP2Q96AA8 810 aa17.43■□□□□ 0.38
NEK9-204ENST00000554258 CAAP1Q9H8G2 361 aa17.43■□□□□ 0.38
NEK9-204ENST00000554258 NCKIPSDQ9NZQ3 722 aa17.43■□□□□ 0.38
NEK9-204ENST00000554258 CYTH4Q9UIA0 394 aa17.43■□□□□ 0.38
NEK9-204ENST00000554258 SLC12A8A0AV02 714 aa17.42■□□□□ 0.38
NEK9-204ENST00000554258 PRAMEF26H0Y7S4 382 aa17.42■□□□□ 0.38
NEK9-204ENST00000554258 STAU1O95793 577 aaKnown RBP17.42■□□□□ 0.38
NEK9-204ENST00000554258 CST3P01034 146 aaPredicted RBP17.42■□□□□ 0.38
NEK9-204ENST00000554258 RALAP11233 206 aa17.42■□□□□ 0.38
NEK9-204ENST00000554258 MTIF2P46199 727 aaKnown RBP17.42■□□□□ 0.38
NEK9-204ENST00000554258 FMO5P49326 533 aa17.42■□□□□ 0.38
NEK9-204ENST00000554258 OXCT1P55809 520 aa17.42■□□□□ 0.38
NEK9-204ENST00000554258 EFEMP1Q12805 493 aa17.42■□□□□ 0.38
NEK9-204ENST00000554258 HNRNPA1L2Q32P51 320 aaKnown RBP17.42■□□□□ 0.38
NEK9-204ENST00000554258 CBWD6Q4V339 395 aa17.42■□□□□ 0.38
NEK9-204ENST00000554258 VWA3BQ502W6 1294 aa17.42■□□□□ 0.38
NEK9-204ENST00000554258 CBWD3Q5JTY5 395 aa17.42■□□□□ 0.38
NEK9-204ENST00000554258 CBWD5Q5RIA9 395 aa17.42■□□□□ 0.38
NEK9-204ENST00000554258 TCERG1LQ5VWI1 586 aa17.42■□□□□ 0.38
NEK9-204ENST00000554258 KRT39Q6A163 491 aa17.42■□□□□ 0.38
NEK9-204ENST00000554258 ZCCHC8Q6NZY4 707 aaKnown RBP17.42■□□□□ 0.38
NEK9-204ENST00000554258 DSG4Q86SJ6 1040 aa17.42■□□□□ 0.38
NEK9-204ENST00000554258 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.42■□□□□ 0.38
NEK9-204ENST00000554258 TNIP3Q96KP6 325 aa17.42■□□□□ 0.38
NEK9-204ENST00000554258 RBSNQ9H1K0 784 aa17.42■□□□□ 0.38
NEK9-204ENST00000554258 KDM4CQ9H3R0 1056 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms