RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 A0A1B0GTQ1 180 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 FAM221BA6H8Z2 402 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 PRAMEF26H0Y7S4 382 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 H0Y8X5 98 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 TLR4O00206 839 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 PLRG1O43660 514 aaKnown RBP11.02□□□□□ -0.65
PNN-203ENST00000554117 ATP9BO43861 1147 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 IGHV4-34P06331 123 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 C1SP09871 688 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 UCHL3P15374 230 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 SDC4P31431 198 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 CDH5P33151 784 aaPredicted RBP11.02□□□□□ -0.65
PNN-203ENST00000554117 GABRB2P47870 512 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 CXCR3P49682 368 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 FAM193AP78312 1265 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 PITX1P78337 314 aaPredicted RBP11.02□□□□□ -0.65
PNN-203ENST00000554117 IL9RQ01113 521 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 SLC20A2Q08357 652 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 NEK5Q6P3R8 708 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 Q6ZVU0 165 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 IQCHQ86VS3 1027 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 ZNF354CQ86Y25 554 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 WDTC1Q8N5D0 677 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 AADATQ8N5Z0 425 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 MFSD2AQ8NA29 543 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 NEK11Q8NG66 645 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 CNDP2Q96KP4 475 aaKnown RBP11.02□□□□□ -0.65
PNN-203ENST00000554117 C1orf74Q96LT6 269 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 HAPLN3Q96S86 360 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 FAM129BQ96TA1 746 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 NPY6RQ99463 290 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 ZYG11BQ9C0D3 744 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 RETREG1Q9H6L5 497 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 PIGVQ9NUD9 493 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 SEPT11Q9NVA2 429 aaKnown RBP11.02□□□□□ -0.65
PNN-203ENST00000554117 ARHGEF38Q9NXL2 777 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 IL36AQ9UHA7 158 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 WASF3Q9UPY6 502 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 TBC1D30Q9Y2I9 924 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 FHOD1Q9Y613 1164 aa11.02□□□□□ -0.65
PNN-203ENST00000554117 ZFC3H1O60293 1989 aaKnown RBP11.01□□□□□ -0.65
PNN-203ENST00000554117 E9PAM4 449 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 CBX4O00257 560 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 ENC1O14682 589 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 CBFA2T3O75081 653 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 PCDH8O95206 1070 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 ALPPL2P10696 532 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 MAT2AP31153 395 aaKnown RBP11.01□□□□□ -0.65
PNN-203ENST00000554117 AKT2P31751 481 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 STAT1P42224 750 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 NSFP46459 744 aaKnown RBP11.01□□□□□ -0.65
PNN-203ENST00000554117 NUMBP49757 651 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 APBA1Q02410 837 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 RAD51Q06609 339 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 EIF4EBP2Q13542 120 aaPredicted RBP11.01□□□□□ -0.65
PNN-203ENST00000554117 POLD3Q15054 466 aaPredicted RBP11.01□□□□□ -0.65
PNN-203ENST00000554117 CDO1Q16878 200 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 CXorf57Q6NSI4 855 aaKnown RBP11.01□□□□□ -0.65
PNN-203ENST00000554117 PPP1R2P3Q6NXS1 205 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 DBX2Q6ZNG2 339 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 ZSCAN30Q86W11 494 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 TRIM69Q86WT6 500 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 IRF2BP1Q8IU81 584 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 RYBPQ8N488 228 aaPredicted RBP11.01□□□□□ -0.65
PNN-203ENST00000554117 DCAF4L2Q8NA75 395 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 MYEOVQ96EZ4 313 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 KLHDC7BQ96G42 594 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 TBCBQ99426 244 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 SPON2Q9BUD6 331 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 SELENOOQ9BVL4 669 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 VPS16Q9H269 839 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 ERVMER34-1Q9H9K5 563 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 ATP13A1Q9HD20 1204 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 SIX2Q9NPC8 291 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 METTL5Q9NRN9 209 aaKnown RBP11.01□□□□□ -0.65
PNN-203ENST00000554117 DONSONQ9NYP3 566 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 SERGEFQ9UGK8 458 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 HS3ST2Q9Y278 367 aa11.01□□□□□ -0.65
PNN-203ENST00000554117 CHD8Q9HCK8 2581 aa11□□□□□ -0.65
PNN-203ENST00000554117 ILVBLA1L0T0 632 aa11□□□□□ -0.65
PNN-203ENST00000554117 SRRM3A6NNA2 597 aaPredicted RBP11□□□□□ -0.65
PNN-203ENST00000554117 F8VZ95 297 aa11□□□□□ -0.65
PNN-203ENST00000554117 KCNK3O14649 394 aa11□□□□□ -0.65
PNN-203ENST00000554117 RFPL3O75679 317 aa11□□□□□ -0.65
PNN-203ENST00000554117 GFPT2O94808 682 aa11□□□□□ -0.65
PNN-203ENST00000554117 CALB1P05937 261 aa11□□□□□ -0.65
PNN-203ENST00000554117 ATXN1LP0C7T5 689 aaKnown RBP11□□□□□ -0.65
PNN-203ENST00000554117 PNMA6AP0CW24 399 aaPredicted RBP11□□□□□ -0.65
PNN-203ENST00000554117 SRCP12931 536 aa11□□□□□ -0.65
PNN-203ENST00000554117 JUPP14923 745 aa11□□□□□ -0.65
PNN-203ENST00000554117 CHRNA3P32297 505 aa11□□□□□ -0.65
PNN-203ENST00000554117 GGCXP38435 758 aa11□□□□□ -0.65
PNN-203ENST00000554117 DNA2P51530 1060 aa11□□□□□ -0.65
PNN-203ENST00000554117 POLR2FP61218 127 aaKnown RBP11□□□□□ -0.65
PNN-203ENST00000554117 DAB2P98082 770 aa11□□□□□ -0.65
PNN-203ENST00000554117 BNC1Q01954 994 aa11□□□□□ -0.65
PNN-203ENST00000554117 SCAPQ12770 1279 aa11□□□□□ -0.65
PNN-203ENST00000554117 CNTN1Q12860 1018 aa11□□□□□ -0.65
PNN-203ENST00000554117 POM121L1PQ3SYA9 428 aa11□□□□□ -0.65
PNN-203ENST00000554117 C5orf22Q49AR2 442 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms