RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 WEE2P0C1S8 567 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 CKMT2P17540 419 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 PROZP22891 400 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 GJC1P36383 396 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 CBX5P45973 191 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 ATN1P54259 1190 aaPredicted RBP9.72□□□□□ -0.85
SIX4-202ENST00000554079 GJA9P57773 515 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 DSC3Q14574 896 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 BRMS1LQ5PSV4 323 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 XAF1Q6GPH4 301 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 DCUN1D2Q6PH85 259 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 ZNF773Q6PK81 442 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 TRAF7Q6Q0C0 670 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 POTEBQ6S5H4 581 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 PRR23BQ6ZRT6 265 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 LYSMD2Q8IV50 215 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 IGDCC3Q8IVU1 814 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 GALNT12Q8IXK2 581 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 PALM2Q8IXS6 379 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 PLPP6Q8IY26 295 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 SCML4Q8N228 414 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 PACRGLQ8N7B6 248 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 PNMA1Q8ND90 353 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 BPIFB6Q8NFQ5 453 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 ZSCAN18Q8TBC5 510 aaPredicted RBP9.72□□□□□ -0.85
SIX4-202ENST00000554079 CPT1BQ92523 772 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 HAS1Q92839 578 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 VTI1AQ96AJ9 217 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 MBOAT7Q96N66 472 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 BEGAINQ9BUH8 593 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 CHID1Q9BWS9 393 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 LHPPQ9H008 270 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 ADAMTS10Q9H324 1103 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 SCPEP1Q9HB40 452 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 UBE2TQ9NPD8 197 aaPredicted RBP9.72□□□□□ -0.85
SIX4-202ENST00000554079 MCM9Q9NXL9 1143 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 XPO7Q9UIA9 1087 aaKnown RBP9.72□□□□□ -0.85
SIX4-202ENST00000554079 DNMT3LQ9UJW3 386 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 NUP50Q9UKX7 468 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 SCAF8Q9UPN6 1271 aaKnown RBP9.72□□□□□ -0.85
SIX4-202ENST00000554079 KIAA1024Q9UPX6 916 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 CAB39Q9Y376 341 aaPredicted RBP9.72□□□□□ -0.85
SIX4-202ENST00000554079 BOLA1Q9Y3E2 137 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 RIPK3Q9Y572 518 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 ISPDA4D126 451 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 OR5K4A6NMS3 321 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 STX16-NPEPL1H3BU86 382 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 TK2O00142 265 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 TRIM38O00635 465 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 HDAC3O15379 428 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 TMEM63AO94886 807 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 SNRPAP09012 282 aaKnown RBP9.71□□□□□ -0.86
SIX4-202ENST00000554079 ARRB2P32121 409 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 EIF2DP41214 584 aaKnown RBP9.71□□□□□ -0.86
SIX4-202ENST00000554079 SLC9A3P48764 834 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 ALDH7A1P49419 539 aaKnown RBP9.71□□□□□ -0.86
SIX4-202ENST00000554079 HK2P52789 917 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 NLRP11P59045 1033 aaKnown RBP9.71□□□□□ -0.86
SIX4-202ENST00000554079 TAS2R40P59535 323 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 KCNA1Q09470 495 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 MERTKQ12866 999 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 ILF2Q12905 390 aaKnown RBP9.71□□□□□ -0.86
SIX4-202ENST00000554079 PUM3Q15397 648 aaKnown RBP9.71□□□□□ -0.86
SIX4-202ENST00000554079 YIF1BQ5BJH7 314 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 DALRD3Q5D0E6 543 aaKnown RBP9.71□□□□□ -0.86
SIX4-202ENST00000554079 IRAK1BP1Q5VVH5 260 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 ABRAXAS1Q6UWZ7 409 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 UTS2BQ765I0 119 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 CHST15Q7LFX5 561 aaPredicted RBP9.71□□□□□ -0.86
SIX4-202ENST00000554079 PTAR1Q7Z6K3 402 aaPredicted RBP9.71□□□□□ -0.86
SIX4-202ENST00000554079 PCGF5Q86SE9 256 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 EPHX4Q8IUS5 362 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 PPIL6Q8IXY8 311 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 CLYBLQ8N0X4 340 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 OR6Q1Q8NGQ2 317 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 HERVK_113Q902F9 699 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 DEPDC7Q96QD5 511 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 BTBD2Q9BX70 525 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 YTHDF1Q9BYJ9 559 aaKnown RBP9.71□□□□□ -0.86
SIX4-202ENST00000554079 IKZF4Q9H2S9 585 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 GREM2Q9H772 168 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 TMEM206Q9H813 350 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 LIN7BQ9HAP6 207 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 TIGARQ9NQ88 270 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 C8orf4Q9NR00 106 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 PLSCR3Q9NRY6 295 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 COPG2Q9UBF2 871 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 SLCO3A1Q9UIG8 710 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 SNX13Q9Y5W8 968 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 SIPA1L1O43166 1804 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 PAPPAQ13219 1627 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 MN1Q10571 1320 aaPredicted RBP9.71□□□□□ -0.86
SIX4-202ENST00000554079 NHSQ6T4R5 1651 aa9.71□□□□□ -0.86
SIX4-202ENST00000554079 A0A1W2PQ72 361 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 TCRBV3S1A0A5B6 114 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 ATP6V1G2-DDX39BF2Z307 99 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 MEN1O00255 615 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 TOR1BO14657 336 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 MAN1A2O60476 641 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 UGT2B11O75310 529 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms