RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 CLDN5O00501 218 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 TIMM44O43615 452 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 TLR5O60602 858 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 PENKP01210 267 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-224ENST00000554040 WNT1P04628 370 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 MPOP05164 745 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 ACP1P24666 158 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 PRKCHP24723 683 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 RXRGP48443 463 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 LSSP48449 732 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 PGFP49763 221 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 TOB1P50616 345 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-224ENST00000554040 ZBTB16Q05516 673 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 CAMK2GQ13555 558 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-224ENST00000554040 ZNF124Q15973 351 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 TMEM119Q4V9L6 283 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 ZNF720Q7Z2F6 126 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 GPBP1Q86WP2 473 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 EXD3Q8N9H8 876 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 RBBP8NLQ8NC74 664 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-224ENST00000554040 ZSWIM2Q8NEG5 633 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 FBF1Q8TES7 1133 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 PIWIL1Q96J94 861 aaKnown RBP7.19□□□□□ -1.26
ATXN3-224ENST00000554040 CDK5RAP3Q96JB5 506 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 C8orf76Q96K31 380 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 FAM84AQ96KN4 292 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 KCNK16Q96T55 309 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 MMS19Q96T76 1030 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 B3GNT5Q9BYG0 378 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 MTMR12Q9C0I1 747 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 IKZF4Q9H2S9 585 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 SNX25Q9H3E2 840 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 ZHX3Q9H4I2 956 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 COMMD8Q9NX08 183 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 RBAKQ9NYW8 714 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-224ENST00000554040 LSM7Q9UK45 103 aaKnown RBP7.19□□□□□ -1.26
ATXN3-224ENST00000554040 NME7Q9Y5B8 376 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 PCDHB1Q9Y5F3 818 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 DOPEY1Q5JWR5 2465 aa7.19□□□□□ -1.26
ATXN3-224ENST00000554040 A0A1W2PR77 199 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 FANCGO15287 622 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 SUV39H1O43463 412 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 TACC1O75410 805 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 LDHAP00338 332 aaKnown RBP7.18□□□□□ -1.26
ATXN3-224ENST00000554040 AFPP02771 609 aaKnown RBP7.18□□□□□ -1.26
ATXN3-224ENST00000554040 IGHV4-34P06331 123 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 CELA3AP09093 270 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 TMEM191BP0C7N4 346 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 EPHA8P29322 1005 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-224ENST00000554040 ATP5C1P36542 298 aaKnown RBP7.18□□□□□ -1.26
ATXN3-224ENST00000554040 ARRB1P49407 418 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-224ENST00000554040 SLC5A3P53794 718 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 GABREP78334 506 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 GRIN1Q05586 938 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 GOLGA8FQ08AF8 430 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 GOLGA8DPQ0D2H9 430 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 SERINC3Q13530 473 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 GNL2Q13823 731 aaKnown RBP7.18□□□□□ -1.26
ATXN3-224ENST00000554040 EIF4HQ15056 248 aaKnown RBP7.18□□□□□ -1.26
ATXN3-224ENST00000554040 ARL13BQ3SXY8 428 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 SFMBT2Q5VUG0 894 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 FYB2Q5VWT5 728 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 CDCP2Q5VXM1 449 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 KIAA0895LQ68EN5 471 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 ANKS1BQ7Z6G8 1248 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 CCDC83Q8IWF9 413 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 FBXO18Q8NFZ0 1043 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 OR6B3Q8NGW1 331 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 SORCS1Q8WY21 1168 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 SAAL1Q96ER3 474 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 ANKRD36BP1Q96IX9 119 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 VCPIP1Q96JH7 1222 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 SLC6A18Q96N87 628 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 MRPL45Q9BRJ2 306 aaKnown RBP7.18□□□□□ -1.26
ATXN3-224ENST00000554040 CEP44Q9C0F1 390 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 POLR1BQ9H9Y6 1135 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 EBF2Q9HAK2 575 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 PDE11AQ9HCR9 933 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 GDF3Q9NR23 364 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 THSD1Q9NS62 852 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 STARD5Q9NSY2 213 aa7.18□□□□□ -1.26
ATXN3-224ENST00000554040 ANKRD17O75179 2603 aaKnown RBP7.18□□□□□ -1.26
ATXN3-224ENST00000554040 TCHHQ07283 1943 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 A8MXQ7 604 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 USP12O75317 370 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 TNNC2P02585 160 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 DNTTP04053 509 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 KRT18P05783 430 aaKnown RBP7.17□□□□□ -1.26
ATXN3-224ENST00000554040 GARTP22102 1010 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 CD38P28907 300 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 CHKAP35790 457 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 RPS14P62263 151 aaKnown RBP7.17□□□□□ -1.26
ATXN3-224ENST00000554040 IRX6P78412 446 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-224ENST00000554040 ST3GAL1Q11201 340 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 DHX8Q14562 1220 aaKnown RBP7.17□□□□□ -1.26
ATXN3-224ENST00000554040 INPP5AQ14642 412 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 LINC00303Q3SY05 128 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 LCE4AQ5TA78 99 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 TMEM215Q68D42 235 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 KLHDC10Q6PID8 442 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms