RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 ZFYVE19Q96K21 471 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 CEP170P1Q96L14 293 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 PPP1R10Q96QC0 940 aaKnown RBP3.46□□□□□ -1.86
SLIRP-202ENST00000553981 HSD17B14Q9BPX1 270 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 LXNQ9BS40 222 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 TEX101Q9BY14 249 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 RNF26Q9BY78 433 aaPredicted RBP3.46□□□□□ -1.86
SLIRP-202ENST00000553981 FZD8Q9H461 694 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 PLEKHA4Q9H4M7 779 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 PDZD7Q9H5P4 517 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 LMAN1LQ9HAT1 526 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 C6orf50Q9HD87 102 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 INTS7Q9NVH2 962 aaKnown RBP3.46□□□□□ -1.86
SLIRP-202ENST00000553981 MTRRQ9UBK8 725 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 PCDHB6Q9Y5E3 794 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 PCDHGA2Q9Y5H1 932 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 CDY1Q9Y6F8 540 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 CEP250Q9BV73 2442 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 NCOR2Q9Y618 2525 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 KIAA1549LQ6ZVL6 1849 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 SDK1Q7Z5N4 2213 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 SPTBN2O15020 2390 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 MAP1BP46821 2468 aaKnown RBP3.45□□□□□ -1.86
SLIRP-202ENST00000553981 PLXNB3Q9ULL4 1909 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 ARHGEF37A1IGU5 675 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 INO80B-WBP1J3KQ70 363 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 PPEF2O14830 753 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 DCLK1O15075 740 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 TADA2AO75478 443 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 ECI2O75521 394 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 SOAT2O75908 522 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 PRAMEF12O95522 483 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 RPS6KB1P23443 525 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 CD40P25942 277 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 U2AF2P26368 475 aaKnown RBP eCLIP3.45□□□□□ -1.861e-7■□□□□ 8
SLIRP-202ENST00000553981 HOXA9P31269 272 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 AVPR1BP47901 424 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 GUCY2FP51841 1108 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 SEC24CP53992 1094 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 NLRP5P59047 1200 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 RNASE9P60153 205 aaKnown RBP3.45□□□□□ -1.86
SLIRP-202ENST00000553981 KRTAP10-11P60412 298 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 NHLH2Q02577 135 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 DUSP2Q05923 314 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 FOXI1Q12951 378 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 GRIK3Q13003 919 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 STK3Q13188 491 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 SQSTM1Q13501 440 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 LRRC32Q14392 662 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 TEAD2Q15562 447 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 UPP1Q16831 310 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 PABPC1LQ4VXU2 614 aaKnown RBP3.45□□□□□ -1.86
SLIRP-202ENST00000553981 XKR9Q5GH70 373 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 XKR4Q5GH76 650 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 PPM1LQ5SGD2 360 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 ZBTB41Q5SVQ8 909 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 NCAPH2Q6IBW4 605 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 FBXO42Q6P3S6 717 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 NOTUMQ6P988 496 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 CYP26C1Q6V0L0 522 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 FAM43BQ6ZT52 329 aaPredicted RBP3.45□□□□□ -1.86
SLIRP-202ENST00000553981 KBTBD6Q86V97 674 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 PLXDC1Q8IUK5 500 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 SYT12Q8IV01 421 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 SFTPA1Q8IWL2 248 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 GPR65Q8IYL9 337 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 ABCA7Q8IZY2 2146 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 DAW1Q8N136 415 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 FRMD1Q8N878 549 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 STKLD1Q8NE28 680 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 RDM1Q8NG50 284 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 URGCPQ8TCY9 931 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 PSPC1Q8WXF1 523 aaKnown RBP3.45□□□□□ -1.86
SLIRP-202ENST00000553981 LINC00476Q8WZB0 136 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 FAM3CQ92520 227 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 C18orf25Q96B23 403 aaPredicted RBP3.45□□□□□ -1.86
SLIRP-202ENST00000553981 ELSPBP1Q96BH3 223 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 ZBTB45Q96K62 511 aaPredicted RBP3.45□□□□□ -1.86
SLIRP-202ENST00000553981 COQ10AQ96MF6 247 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 JAKMIP1Q96N16 626 aaKnown RBP3.45□□□□□ -1.86
SLIRP-202ENST00000553981 MTMR9Q96QG7 549 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 EIF2AK1Q9BQI3 630 aaKnown RBP3.45□□□□□ -1.86
SLIRP-202ENST00000553981 POLR3CQ9BUI4 534 aaPredicted RBP3.45□□□□□ -1.86
SLIRP-202ENST00000553981 COLEC11Q9BWP8 271 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 INO80BQ9C086 356 aaPredicted RBP3.45□□□□□ -1.86
SLIRP-202ENST00000553981 POLR3FQ9H1D9 316 aaPredicted RBP3.45□□□□□ -1.86
SLIRP-202ENST00000553981 ARRDC1-AS1Q9H2J1 176 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 PTPRHQ9HD43 1115 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 HPS4Q9NQG7 708 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 GTSE1Q9NYZ3 720 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 DDX25Q9UHL0 483 aaKnown RBP3.45□□□□□ -1.86
SLIRP-202ENST00000553981 NAP1L2Q9ULW6 460 aaPredicted RBP3.45□□□□□ -1.86
SLIRP-202ENST00000553981 CLCA2Q9UQC9 943 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 OBSL1O75147 1896 aa3.45□□□□□ -1.86
SLIRP-202ENST00000553981 TSC2P49815 1807 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 TNRC6BQ9UPQ9 1833 aaKnown RBP3.44□□□□□ -1.86
SLIRP-202ENST00000553981 DENND4CQ5VZ89 1909 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 ADAMTS9Q9P2N4 1935 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 F5P12259 2224 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 NUP210Q8TEM1 1887 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms