RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 CASS4Q9NQ75 786 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 PACSIN3Q9UKS6 424 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 G3BP2Q9UN86 482 aaKnown RBP14.86□□□□□ -0.03
ACTN1-211ENST00000553882 GNEQ9Y223 722 aaKnown RBP14.86□□□□□ -0.03
ACTN1-211ENST00000553882 NEMP1O14524 444 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 PHGDHO43175 533 aaKnown RBP14.85□□□□□ -0.03
ACTN1-211ENST00000553882 LRIG2O94898 1065 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 SRGAP2BP0DMP2 458 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 YBX3P16989 372 aaKnown RBP eCLIP14.85□□□□□ -0.033e-6■■□□□ 14.2
ACTN1-211ENST00000553882 AVPR1AP37288 418 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 PSEN2P49810 448 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 ADAM17P78536 824 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 CUL3Q13618 768 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 ITGA7Q13683 1181 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 KCTD11Q693B1 232 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 OTOP3Q7RTS5 596 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 PPP1R10Q96QC0 940 aaKnown RBP14.85□□□□□ -0.03
ACTN1-211ENST00000553882 APBA2Q99767 749 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 DDX50Q9BQ39 737 aaKnown RBP14.85□□□□□ -0.03
ACTN1-211ENST00000553882 PAAF1Q9BRP4 392 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 UNKQ9C0B0 810 aaKnown RBP14.85□□□□□ -0.03
ACTN1-211ENST00000553882 NMRAL1Q9HBL8 299 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 FLRT1Q9NZU1 646 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 PCDHB12Q9Y5F1 795 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 TSC2P49815 1807 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 MAGEA12P43365 314 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 RNF220Q5VTB9 566 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 HPS6Q86YV9 775 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 PHC3Q8NDX5 983 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 SPATA22Q8NHS9 363 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 OR52B2Q96RD2 323 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 SLC9A7Q96T83 725 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 PRDM16Q9HAZ2 1276 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 CDH22Q9UJ99 828 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 CLEC11AQ9Y240 323 aa14.85□□□□□ -0.03
ACTN1-211ENST00000553882 CASTOR2A6NHX0 329 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 LRPAP1P30533 357 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 DSG1Q02413 1049 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 ARL13BQ3SXY8 428 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 RWDD4Q6NW29 188 aaKnown RBP14.84□□□□□ -0.03
ACTN1-211ENST00000553882 TDRD5Q8NAT2 981 aaKnown RBP14.84□□□□□ -0.03
ACTN1-211ENST00000553882 RNF34Q969K3 372 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 NTAN1Q96AB6 310 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 CMTM5Q96DZ9 223 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 SIK2Q9H0K1 926 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 CDH19Q9H159 772 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 TASP1Q9H6P5 420 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 WDR55Q9H6Y2 383 aaPredicted RBP14.84□□□□□ -0.03
ACTN1-211ENST00000553882 SCOCQ9UIL1 159 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 ZCCHC18P0CG32 403 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 ALOX15P16050 662 aaPredicted RBP14.84□□□□□ -0.03
ACTN1-211ENST00000553882 MPSTP25325 297 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 SERPINB5P36952 375 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 CRYBB1P53674 252 aaPredicted RBP14.84□□□□□ -0.03
ACTN1-211ENST00000553882 SCAPQ12770 1279 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 GRM3Q14832 879 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 ARHGAP36Q6ZRI8 547 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 OR6Y1Q8NGX8 325 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 HDAC11Q96DB2 347 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 PTPN18Q99952 460 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 GATA5Q9BWX5 397 aaPredicted RBP14.84□□□□□ -0.03
ACTN1-211ENST00000553882 CNGB3Q9NQW8 809 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 CPA4Q9UI42 421 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 ADAM28Q9UKQ2 775 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 CDY2AQ9Y6F7 541 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 CDY1Q9Y6F8 540 aa14.84□□□□□ -0.03
ACTN1-211ENST00000553882 TRIM13O60858 407 aa14.83□□□□□ -0.03
ACTN1-211ENST00000553882 MT-CYBP00156 380 aaPredicted RBP14.83□□□□□ -0.03
ACTN1-211ENST00000553882 ITGAXP20702 1163 aa14.83□□□□□ -0.03
ACTN1-211ENST00000553882 CDK7P50613 346 aa14.83□□□□□ -0.03
ACTN1-211ENST00000553882 ASPHQ12797 758 aa14.83□□□□□ -0.03
ACTN1-211ENST00000553882 CDC16Q13042 620 aa14.83□□□□□ -0.03
ACTN1-211ENST00000553882 ZNF460Q14592 562 aa14.83□□□□□ -0.03
ACTN1-211ENST00000553882 CCL14Q16627 93 aa14.83□□□□□ -0.03
ACTN1-211ENST00000553882 RNF111Q6ZNA4 994 aa14.83□□□□□ -0.03
ACTN1-211ENST00000553882 CLEC14AQ86T13 490 aa14.83□□□□□ -0.03
ACTN1-211ENST00000553882 SPATA6LQ8N4H0 392 aa14.83□□□□□ -0.03
ACTN1-211ENST00000553882 ISL2Q96A47 359 aa14.83□□□□□ -0.03
ACTN1-211ENST00000553882 EPAS1Q99814 870 aa14.83□□□□□ -0.03
ACTN1-211ENST00000553882 VCXQ9H320 206 aa14.83□□□□□ -0.03
ACTN1-211ENST00000553882 S100A14Q9HCY8 104 aa14.83□□□□□ -0.03
ACTN1-211ENST00000553882 DFFAO00273 331 aa14.83□□□□□ -0.04
ACTN1-211ENST00000553882 NCAM2O15394 837 aa14.83□□□□□ -0.04
ACTN1-211ENST00000553882 FBXO21O94952 628 aa14.83□□□□□ -0.04
ACTN1-211ENST00000553882 CTSHP09668 335 aa14.83□□□□□ -0.04
ACTN1-211ENST00000553882 GALNT2Q10471 571 aa14.83□□□□□ -0.04
ACTN1-211ENST00000553882 LBRQ14739 615 aaKnown RBP14.83□□□□□ -0.04
ACTN1-211ENST00000553882 POU6F1Q14863 301 aa14.83□□□□□ -0.04
ACTN1-211ENST00000553882 EPGNQ6UW88 154 aa14.83□□□□□ -0.04
ACTN1-211ENST00000553882 KDELC2Q7Z4H8 507 aa14.83□□□□□ -0.04
ACTN1-211ENST00000553882 SPNS2Q8IVW8 549 aa14.83□□□□□ -0.04
ACTN1-211ENST00000553882 CNTD1Q8N815 330 aa14.83□□□□□ -0.04
ACTN1-211ENST00000553882 ECSITQ9BQ95 431 aa14.83□□□□□ -0.04
ACTN1-211ENST00000553882 ACE2Q9BYF1 805 aaPredicted RBP14.83□□□□□ -0.04
ACTN1-211ENST00000553882 IL22Q9GZX6 179 aa14.83□□□□□ -0.04
ACTN1-211ENST00000553882 MIOSQ9NXC5 875 aa14.83□□□□□ -0.04
ACTN1-211ENST00000553882 TIMM44O43615 452 aa14.82□□□□□ -0.04
ACTN1-211ENST00000553882 COX4I1P13073 169 aa14.82□□□□□ -0.04
ACTN1-211ENST00000553882 EPHA3P29320 983 aa14.82□□□□□ -0.04
ACTN1-211ENST00000553882 TBL3Q12788 808 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms