RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 MCM7P33993 719 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 HOXD12P35452 270 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 VIPR2P41587 438 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 DGKEP52429 567 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 ABHD18Q0P651 414 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 ELAVL2Q12926 359 aaKnown RBP6.43□□□□□ -1.38
ATXN3-223ENST00000553686 ADRM1Q16186 407 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 FBXO43Q4G163 708 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 ARHGAP29Q52LW3 1261 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 CEP55Q53EZ4 464 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 FAM180AQ6UWF9 173 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 TOGARAM2Q6ZUX3 1019 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 DOK3Q7L591 496 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 LPCAT2Q7L5N7 544 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 RABEPKQ7Z6M1 372 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 ZNF410Q86VK4 478 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 HACE1Q8IYU2 909 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 ELMOD1Q8N336 334 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 GALNT15Q8N3T1 639 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 PNPLA1Q8N8W4 532 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 LEMD2Q8NC56 503 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 OR52N2Q8NGI0 321 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 CCDC26Q8TAB7 109 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 LNX1Q8TBB1 728 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-223ENST00000553686 RRP36Q96EU6 259 aaKnown RBP6.43□□□□□ -1.38
ATXN3-223ENST00000553686 PI4K2AQ9BTU6 479 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 GTPBP2Q9BX10 602 aaKnown RBP6.43□□□□□ -1.38
ATXN3-223ENST00000553686 ACE2Q9BYF1 805 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-223ENST00000553686 AGO4Q9HCK5 861 aaKnown RBP6.43□□□□□ -1.38
ATXN3-223ENST00000553686 SEC63Q9UGP8 760 aaKnown RBP6.43□□□□□ -1.38
ATXN3-223ENST00000553686 TRPS1Q9UHF7 1281 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 PCDHA6Q9UN73 950 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 ZMYM6O95789 1325 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 WDFY3Q8IZQ1 3526 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 TEP1Q99973 2627 aaKnown RBP6.43□□□□□ -1.38
ATXN3-223ENST00000553686 ABCA12Q86UK0 2595 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 CACNA1EQ15878 2313 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 A0A087WZ62 844 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 KRT38O76015 456 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 CCNE2O96020 404 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 CFIP05156 583 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 GSPT1P15170 499 aaKnown RBP6.42□□□□□ -1.38
ATXN3-223ENST00000553686 OR1D2P34982 312 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 CRHR1P34998 444 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 NCBP1Q09161 790 aaKnown RBP6.42□□□□□ -1.38
ATXN3-223ENST00000553686 FCHO2Q0JRZ9 810 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 KLF10Q13118 480 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 ITGB3BPQ13352 177 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-223ENST00000553686 DUOXA1Q1HG43 343 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 MCMDC2Q4G0Z9 681 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 COLEC12Q5KU26 742 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 SPDYCQ5MJ68 293 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 FAM171A1Q5VUB5 890 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 TSHZ3Q63HK5 1081 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 ANKS6Q68DC2 871 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 LMBRD2Q68DH5 695 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-223ENST00000553686 SYT13Q7L8C5 426 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 GPRIN1Q7Z2K8 1008 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 TBC1D10CQ8IV04 446 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 CPT1CQ8TCG5 803 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 ZNF483Q8TF39 744 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-223ENST00000553686 ZNF480Q8WV37 535 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 PIBF1Q8WXW3 757 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 GAD1Q99259 594 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 KRT23Q9C075 422 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 PCED1AQ9H1Q7 454 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 SLITRK6Q9H5Y7 841 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 TBC1D22BQ9NU19 505 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 IL17BQ9UHF5 180 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 TPCN1Q9ULQ1 816 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 ATP8A1Q9Y2Q0 1164 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 PCDHA10Q9Y5I2 948 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 FNDC1Q4ZHG4 1894 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-223ENST00000553686 TTC41PQ6P2S7 1318 aa6.42□□□□□ -1.38
ATXN3-223ENST00000553686 KIAA1217Q5T5P2 1943 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 ARHGEF37A1IGU5 675 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 DDX39AO00148 427 aaKnown RBP6.41□□□□□ -1.38
ATXN3-223ENST00000553686 IPO5O00410 1097 aaKnown RBP6.41□□□□□ -1.38
ATXN3-223ENST00000553686 PRRG1O14668 218 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 CYTH3O43739 400 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 SLC28A2O43868 658 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 SH3BP5O60239 455 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 RECQL4O94761 1208 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 SCAF4O95104 1147 aaKnown RBP6.41□□□□□ -1.38
ATXN3-223ENST00000553686 CD59P13987 128 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 ITPKBP27987 946 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 PTPN7P35236 360 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 CCR10P46092 362 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 PTTG1IPP53801 180 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 RHDQ02161 417 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 BYSLQ13895 437 aaKnown RBP6.41□□□□□ -1.38
ATXN3-223ENST00000553686 GRM4Q14833 912 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 ITPRIPL2Q3MIP1 535 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 TMEM196Q5HYL7 178 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 PRAMEF14Q5SWL7 426 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 Q6ZVL8 140 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 GLRX5Q86SX6 157 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 TICAM2Q86XR7 235 aa6.41□□□□□ -1.38
ATXN3-223ENST00000553686 SMAP1Q8IYB5 467 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-223ENST00000553686 TTC8Q8TAM2 541 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms